PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63176.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

WRKY

Protein Properties

Length: 948aa MW: 98801.6 Da PI: 8.3485

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	82.3	5e-26	381	436	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D +nWrKYGqK+vkgs++prsYY+Ct+++C++kk+ver++ + + + Y+++Hnh+ GBG63176.1 381 DCWNWRKYGQKHVKGSNHPRSYYKCTHPSCSAKKRVERTH-SGLDLSVEYKNDHNHP 436 99************************************.888899*******8 PP
2	WRKY	101	6.9e-32	675	733	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK vkg+ +prsYY+Ct+++Cpv+k+vers++dp++v++tYeg+H+he GBG63176.1 675 MDDGWRWRKYGQKYVKGKSHPRSYYKCTTPDCPVRKHVERSTQDPSMVITTYEGKHTHE 733 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 948 aa Download sequence
MDSGVRDGGA AAPPLPPAQQ ESKVMKPTPQ RGGLSTDFST LGHSTATVSK SNSFCFSFPP 60 SSTSTATNTT SNGSGGEAIG GGEGDLTVKT EDSTALKSSS TKHFFGDKLD SDNKSSSPFL 120 SRNNSFGGLC GGNSGGSGGG KSSDADANHM LGKAAMSTSV SSAGMGASFL HHDRGNMVVG 180 VGAVGSSPRP GSPTKQPLMK ARYRNHCPGT LLTHLAPGVN PSVMLESPLL IDAPQVVPSP 240 TSGIMNFGYH ASKAYMPSDM SKETSHSSGF LIGRNQSHQR NDLSSSCLGG GGGGGGGGGG 300 GGGGGGTSPR AIPAVPIMTL TNSLQPHQET TPALTATQSH EQLPQKHQAR QEAQEERRAV 360 ARPVQGSGRS AGGFQERSAP DCWNWRKYGQ KHVKGSNHPR SYYKCTHPSC SAKKRVERTH 420 SGLDLSVEYK NDHNHPQPAM LRRSANAAAA RMRNSNLGKD SGKNSSGGPS SHLTLAIVGS 480 DRDGGWGNSG DGRELNLDGG KVTVIEGEGQ SDGEDMWTRV HDTNRHSLDD DAKSPPNVGA 540 VRLDRLNSSG DASPSNCEDG LSSAITVANS SPVCGGGGPG RSGQASARLL YPPYSGSASP 600 PHSSLSRSSF SSADMDDMED TEMELGMTTC AKRGVEGGDD LDGCKKRRKD KKEGVPRAVR 660 EPRFVIQTVS EREVMDDGWR WRKYGQKYVK GKSHPRSYYK CTTPDCPVRK HVERSTQDPS 720 MVITTYEGKH THEQPQVGLR GGSNLGCMVG PSLLGGNGNG RGSDDISTIC MNGTSNGGRN 780 GNGSRSSMIV QGAPLGQAPT LMLGNYGRIG SDDGVRSSGV GSKGGSGSLY RGYGDSGMRK 840 DDNNGAEVEL GMRVGSVDSD SMRGSDGVNG LQGVAMALVR IGGESDDEGI VRGRSLTHRF 900 DSAADGMDHR QHDGLEGVSS GSNVARARLE MAEGRGGMDN CVQPQPSF

Sequence ? help Back to Top

Protein Sequence Length: 948 aa Download sequence

MDSGVRDGGA AAPPLPPAQQ ESKVMKPTPQ RGGLSTDFST LGHSTATVSK SNSFCFSFPP  60
SSTSTATNTT SNGSGGEAIG GGEGDLTVKT EDSTALKSSS TKHFFGDKLD SDNKSSSPFL  120
SRNNSFGGLC GGNSGGSGGG KSSDADANHM LGKAAMSTSV SSAGMGASFL HHDRGNMVVG  180
VGAVGSSPRP GSPTKQPLMK ARYRNHCPGT LLTHLAPGVN PSVMLESPLL IDAPQVVPSP  240
TSGIMNFGYH ASKAYMPSDM SKETSHSSGF LIGRNQSHQR NDLSSSCLGG GGGGGGGGGG  300
GGGGGGTSPR AIPAVPIMTL TNSLQPHQET TPALTATQSH EQLPQKHQAR QEAQEERRAV  360
ARPVQGSGRS AGGFQERSAP DCWNWRKYGQ KHVKGSNHPR SYYKCTHPSC SAKKRVERTH  420
SGLDLSVEYK NDHNHPQPAM LRRSANAAAA RMRNSNLGKD SGKNSSGGPS SHLTLAIVGS  480
DRDGGWGNSG DGRELNLDGG KVTVIEGEGQ SDGEDMWTRV HDTNRHSLDD DAKSPPNVGA  540
VRLDRLNSSG DASPSNCEDG LSSAITVANS SPVCGGGGPG RSGQASARLL YPPYSGSASP  600
PHSSLSRSSF SSADMDDMED TEMELGMTTC AKRGVEGGDD LDGCKKRRKD KKEGVPRAVR  660
EPRFVIQTVS EREVMDDGWR WRKYGQKYVK GKSHPRSYYK CTTPDCPVRK HVERSTQDPS  720
MVITTYEGKH THEQPQVGLR GGSNLGCMVG PSLLGGNGNG RGSDDISTIC MNGTSNGGRN  780
GNGSRSSMIV QGAPLGQAPT LMLGNYGRIG SDDGVRSSGV GSKGGSGSLY RGYGDSGMRK  840
DDNNGAEVEL GMRVGSVDSD SMRGSDGVNG LQGVAMALVR IGGESDDEGI VRGRSLTHRF  900
DSAADGMDHR QHDGLEGVSS GSNVARARLE MAEGRGGMDN CVQPQPSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	645	649	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01080.1	2e-32	WRKY family protein