PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63165.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 486aa MW: 52412.5 Da PI: 9.8774

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.2	4.2e-08	242	320	2	76
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 W+ +e l+L ++ +e++ + ++ ++ + e+vs+kmre g rs++ C++kw++l +++k i + k s+++ GBG63165.1 242 WPLEERLDLARFMKEDDAMMTMASgrlkhaRRSVRNEWVSRKMREAGWIRSAEDCRKKWSELMGKMKDILHKCKA--SGKQ 320 888888888888888777777543334344888899******************************988766665..3444 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDGRGWASDT PVSGGQGSRF PRHMGNENLG FEAELSMGLS SMTSDSENWI RPRQQTSMHS 60 RFPGTYTSGM DGSTRVVTDP AQRAHPLASP AVGGAACAPV HTTQIQGGPR PQAFQGASFM 120 PPPAPACMLP PSVDRLRTAA VERAWSNVRN VGGGVVEDVG GVRQVVNAPP SPMDQGERDD 180 RRRGEEARPA VADVHVGQQG SSGGNGNRGG RVAESGSDVD TGDDNARVDG GGAPAKRRTR 240 PWPLEERLDL ARFMKEDDAM MTMASGRLKH ARRSVRNEWV SRKMREAGWI RSAEDCRKKW 300 SELMGKMKDI LHKCKASGKQ SYWDMSVEDK KKEGIPTTFE QPLWEEMKVM KAVFPSDKET 360 PLGNGSSEGG GRSSATTEED DRLRKKRRGA TGRERVGDRP PVLTVERALL DSSMAVNEGT 420 EKAAGTLARA STKGAQLLAT QVSAVASAIK EGNAVLQMLV GVMADRRRNG NGNREGEHGD 480 SSPSTW

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDGRGWASDT PVSGGQGSRF PRHMGNENLG FEAELSMGLS SMTSDSENWI RPRQQTSMHS  60
RFPGTYTSGM DGSTRVVTDP AQRAHPLASP AVGGAACAPV HTTQIQGGPR PQAFQGASFM  120
PPPAPACMLP PSVDRLRTAA VERAWSNVRN VGGGVVEDVG GVRQVVNAPP SPMDQGERDD  180
RRRGEEARPA VADVHVGQQG SSGGNGNRGG RVAESGSDVD TGDDNARVDG GGAPAKRRTR  240
PWPLEERLDL ARFMKEDDAM MTMASGRLKH ARRSVRNEWV SRKMREAGWI RSAEDCRKKW  300
SELMGKMKDI LHKCKASGKQ SYWDMSVEDK KKEGIPTTFE QPLWEEMKVM KAVFPSDKET  360
PLGNGSSEGG GRSSATTEED DRLRKKRRGA TGRERVGDRP PVLTVERALL DSSMAVNEGT  420
EKAAGTLARA STKGAQLLAT QVSAVASAIK EGNAVLQMLV GVMADRRRNG NGNREGEHGD  480
SSPSTW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	387	DRLRKKR