PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62733.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 319aa    MW: 34068 Da    PI: 7.7696
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.32.3e-09991522681
    trihelix  26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                 +++ ++e++s++mre g++r+ + C++kw +l  + k+i++  ++  s+++s + +
  GBG62733.1  99 RRQDRLEWISNRMREAGYRRNGEDCRKKWASLMDKAKEINDKCGR--SGDESYWEM 152
                 67899******************************9999999987..567767765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGSEHMSAME TSSLPVPPVS LPDGPPSPPP SNTTPRSGKE AATITDAPVG ESDAKRASNK  60
PARKFSQLWS GDEQVTLARV YGEGDALCAS ASGPHRCMRR QDRLEWISNR MREAGYRRNG  120
EDCRKKWASL MDKAKEINDK CGRSGDESYW EMMAEKRREL GVHPAFDKVL WDAMGWALRK  180
LSVTCEHTLA SDNMQSQTED VTSSGSGGRG KSARDASDGS DSGTKSKRAR SRESLGNDDS  240
PQSLSVAMRE STKAYCHGLE QAACTMVSAT TKGAEIVGGP IGEMAGKIGA VADAMVGGNE  300
VLAQLVGVLA ARSQGSRQV