PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62249.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C3H
Protein Properties Length: 480aa    MW: 52880 Da    PI: 6.7615
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.66.8e-06418441226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 k + Cr+f++   C +G++C++ H+
  GBG62249.1 418 KLPVCRDFLK-DKCVRGSSCRYVHP 441
                 6789******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MYPYFPVEGG LESEAAGSSP YDAVATEVER NGGVKWKEGD EDNRLVDRRR AEEEEEEEEE  60
EEEEEEQEEE RTGGKRAWSD EEKEEEDRSR SSGRGRRRRR SSSRGRGGRL AGSSPSPMEN  120
NSGKRSTTFN VPVCKDFGRG RCVRGDYECR YAHPPVGMAT EPTPEGDAVT VCNDFLRERC  180
TRGPACRYYH PPPHIRQAIP GIPDRPDRGV SAAMVAAIPP PPVMPLNLAG IAGGGGGMRP  240
ALEVCRDYLR NCCTRDASDC RFAHTTPSTG QGNMVTVCQD FLKGRCERDS CRYFHPPEHL  300
KPRIRDLPQG GGMLGANAIE ARINAAAYQA AYQAYAASLL EMQQQAAKRI RLEAEEYGPV  360
AAGLHGVGAY GLPLDGNRLR KSPLESSYPY GHGGVFPPPP PSLSLLNAHG MGNPDHDKLP  420
VCRDFLKDKC VRGSSCRYVH PDANTAVVDN CVTVCRDSLK GRCQREVCRF YHPPAKREAA