PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG62149.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bZIP

Protein Properties

Length: 550aa MW: 57249.1 Da PI: 5.3035

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG62149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.2	8.7e-14	374	425	2	53
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++kr rr+ +NRe+ArrsRqRK++ ++ Le v+ L eN aL +++e GBG62149.1 374 MDRKRLRRMLSNRESARRSRQRKQEHLDSLEVQVARLRVENAALVRQANEVA 425 578*****************************************99888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MNHGASQGVL RRATPAAAAA LDQLMMPAAA MAVSSVGGGE SHSLMHSSSW QAPAWISSLR 60 AVSSTYTHHP SSASSSPPTH SSAYLHPFAA CTPPPPPPPP PPPLVNFNFD FASRFKEMYT 120 LAEEDAAAAR LADGSAGPQV HDQQLDCEGE EREEREQQDQ EDRFLHLFIR NLHHQYISNA 180 AMGGEGGDGG GHGGGGGGGS SSSSGTGSDY GNCQDCAMSS MGGLTGPSAM AAATAAAATA 240 AAGGYPSGET FVDMDGDATW SGGDYSDAVA AVAAAAGGAG GCAQAGEGGG SPFECDQQIL 300 RIAAAAGGAS ACTAITIAGC ERQNSCGDHD GRRSMHPLRA GKGGGGEMVE CDERAKMEMQ 360 HFAEEHSLLT DMEMDRKRLR RMLSNRESAR RSRQRKQEHL DSLEVQVARL RVENAALVRQ 420 ANEVARQFHD RSKENHQLKR EVATLRMQMA EILSAVQMHV TAAAAAAAAA NNNNNNTING 480 RDVSNSWSSG SQSAEMMMEE DMSSEIKPTP AVAAAAIVPS NATSVNAVAT NAAAAVLNDM 540 RLTDPRSSEV

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MNHGASQGVL RRATPAAAAA LDQLMMPAAA MAVSSVGGGE SHSLMHSSSW QAPAWISSLR  60
AVSSTYTHHP SSASSSPPTH SSAYLHPFAA CTPPPPPPPP PPPLVNFNFD FASRFKEMYT  120
LAEEDAAAAR LADGSAGPQV HDQQLDCEGE EREEREQQDQ EDRFLHLFIR NLHHQYISNA  180
AMGGEGGDGG GHGGGGGGGS SSSSGTGSDY GNCQDCAMSS MGGLTGPSAM AAATAAAATA  240
AAGGYPSGET FVDMDGDATW SGGDYSDAVA AVAAAAGGAG GCAQAGEGGG SPFECDQQIL  300
RIAAAAGGAS ACTAITIAGC ERQNSCGDHD GRRSMHPLRA GKGGGGEMVE CDERAKMEMQ  360
HFAEEHSLLT DMEMDRKRLR RMLSNRESAR RSRQRKQEHL DSLEVQVARL RVENAALVRQ  420
ANEVARQFHD RSKENHQLKR EVATLRMQMA EILSAVQMHV TAAAAAAAAA NNNNNNTING  480
RDVSNSWSSG SQSAEMMMEE DMSSEIKPTP AVAAAAIVPS NATSVNAVAT NAAAAVLNDM  540
RLTDPRSSEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	390	396	RRSRQRK
2	390	397	RRSRQRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13600.1	2e-16	bZIP family protein