PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61952.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Protein Properties

Length: 3601aa MW: 377387 Da PI: 5.0366

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.6e-10	2867	2944	4	86
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++++vl++ +l++pk f++ +++s ++t+ ++g + ++ + ++r+ +++GW++F ++++L++gD +v+++ + GBG61952.1 2867 CKMTPSVLRN-WLRIPKAFMSLL---PQGSGDVTFIGPNGYRCKLGWLW-SPDKRCGFSSGWRQFIRDQELQDGDWIVLEFLK 2944 5678888887.6******433...456779***********65.55568889*******************9654 PP

Sequence ? help Back to Top
Protein Sequence Length: 3601 aa Download sequence
MGHPGGKSGL EEKKGEEDED VGCQKQGVGN GIARSGDHND GEGAVFSKRT EEGVEEAAVE 60 GNAEMARGED SPYTLTGAQG EEAGSKLEYA TNVSDPGMAH DDSRAGSSDT RSSVQTNRNG 120 KLDSEGGHDG DAKDIGKDSS VNSDKPGSNT DNRCAEDPDG HNNAPGLIAD SIPHRNVGNE 180 SANIDLGTPN SSCVMQSGTI SMISKGRDDG VRARVMGMRV DGGFGNEHGL SGDCNSDSCS 240 KPDLVKADAA MGSVLSVISE CCENVKDTST VDGECGNDND TSVMDDNLCR ASNVSGAGCG 300 VQRRGIRLTG ERADGKEAAC HMVEVNADTV MGTVVASLIC ESEDFKATGA LDNNVGTISD 360 ISVADCLVIR EHSDRGGGQV ADCSTGVFSV NGVGTSVLRD DSEGLASGDG ASSGKVDLAG 420 VACIRSLSGE NVASEEREAG SGSVQLAKRI NDKDSVGCCQ TIPDASVALP VSDAGVAPAH 480 GGIPTKGGID ADPTAVGENE ESKSLEDAAD TLLAGMNSRG ASRVTLPNGE SLEQTKGPGL 540 NVAKAALSLQ TIENGKNAPG KAAGAMEVAD ANESEKIREV AAQVRDGADG TATEDNPTDS 600 MEPVSTGQKT GKNEAVLCGK PSQDSAMVCL GDDGDGDGGK EQTAADVAGA VPGDTVEGTV 660 VHGDRFVPDP QQLMDPRVDG RDHACGVDSS GGIPLMAINN KSSTGDETDS LRDNSVNDRN 720 SCGDGSGGGG GGKQFSSCTS SVNDGDQVDT SNVNKTSAGS AGKRGSISYG DVDPKQVPPC 780 NSSDSQMGGD GVSVSQLTSG NRCERGVESG TGSGAAMFLG MAVAGSQEWT VLDVPRVEGL 840 CDNALSADAM MQHGFAMMHD DNAIDSGDGV VGDSDKCTGV EHAHCGDGDA ALGKNGQTQR 900 PVKSGSRGTC LTGSVKGFAV DSAGRGGGSR NSLCVEVARC GDDVQGAIYS ASHVEAASVI 960 HNDGSAGIDS IASISTGYFS DSCRGQGKLP RVHPDDAGNG VCDQRSLGSN EAGWNGVAGC 1020 AQDAGPATGI CSDDGGATFS PNGTVNTGRE ALQEDKATSG HVPENNDAEA RGCSGGEVTN 1080 RGSSVGMVLS LIHIVAECGE GVMKQGPANG DGVMCHNTKA TEQGAAVNGL VSMPDRKRLC 1140 ADRSEQVSLA RGHAEPDAWR HASAAASSSP TQDLQIVNCQ TCVPAAAELA SNADEGAHLE 1200 GSCVTPSIGD SAIADVDEGA TAQGRDVLDE GKSALSAVAV SLDHDVLVMG SPTQALGGEH 1260 ATPFLEGCRP TRNAKGVDEG EVRLTEHGCI GDPNDGVAKG NDDSLLLDSH APLRSSGDNR 1320 VRNRNCMDGA PCNEDGKAQQ CTACEVVRPS VLALPCSQEG ICDPSKSATG FSQPPKRNDG 1380 GLVGINGRHN SVTCDQIVIV RQHRAPGAEE SPEAGTSGWS DTVVTACLNE SGTDFHASKV 1440 KEGELVCAVN CADGAASDHK NHAGNGHSGN DGAAGAARSL LHYTQIDRHH SNLGVHCACK 1500 PGNHKPLNDC EFANDGAGSG NCIGHADCTG GSDADCQRED YAAVSLTGAL VKPTPEGQDV 1560 GDLKVFGNGD TGNLNSDNIG EGDRRPQPCS GGSGTCVAGS YAPDVSSGSG RESDASVAGI 1620 IDCSEVCADD IPMAVDGCRD THVPLVLGGQ GDSVVARLTE GYGRSSADDG KRNEHVRGGG 1680 TPIRYACNNL SGKSEDLCDQ KCNSTGQILG AMTEIAKREE KPSGVGGGQD DDLGDDHVAT 1740 HAGEAQGKSD GGDVGEDAGC GRSSGPRPVV KDDNAGEEPS SGGGGHGDLL RDCLSCHDLV 1800 ISLFENAECN CAANVPTGET CGRGNSHGLE LEFDEAVNRP PVGDGCHVAT LGNGLAKSHA 1860 RDSEKEGSAS RGEACKSSCS SEPAMSVDRP VEDSVLQGGD HEGGIPQDCC IFGDVVTSSS 1920 WDAERKSQNS DIQQNQICKK RMKSNSPEPT VKGDKAVEAP SLVGGTVEYV PSFDPFCISL 1980 GGDPEAKGAV DVHPCCEERG DLVSIIKAEE SIVEPSVGAN GILADDSPGI SPENCGVDVH 2040 TRRECERIVT PVQVEVANTN VELAPLRAGD NVAVLRENPI FDDPATSPSR IGADLDVLPG 2100 CELSTLGAGD YDEAADTKFL FVRVDDRTIN PLGHDGALGE RRAPSLHSCQ SRRTKKHQNS 2160 FGSIEHGGAG SLCLHPDTLE EVPRTGAVAS KDDSDNVSVT THAQTPAIDS ASAATATAAV 2220 MGNVGGANGG QRESDLIFNA GPTCWSVNTD GMCAPYVQPA NRQHDGGRHN HGSGDSGEDA 2280 KACVAGAASE LAYDGVAQES DIPTGGLQRT VHEERSKFCR TGVELISNST GRAFVGENGC 2340 GKISNGNVGS GSESGLEKHV SVNSVGNGIC VQRSRGKGLH VFLSVKDTSA VEGGQKGGLG 2400 QTGGCCSVDA SQRMLSIAPS FSVRLCPSLK DGTIVINSRH GSTVLSQAVE NDNHTISGRD 2460 EKGIGVAADD GDDGVEVRGE CHSSVYPVAR DLVSVERSDT KGHDSEAAEA DQQHELKQQA 2520 ACTVDDLNKT VSIPYKFQLR LYASSKEAQA AAAHCVRSLE RNRPAIWKQI GKNRRSKSPG 2580 AVALHSMPIY RSWFQKSVLG HVEKGHCEVD VVVEDWEGSR WGMTWHHRKS VLLNGWANLM 2640 NFHSLAFGDF IVFETVGPSL LKIYAFCIGD EEDGHGAIQE QDGDGEYRCG KRLLEARKRL 2700 RQAKRRKAGT VTHPYQQSPD SGLHQSSVIN YEHVHLSACN NEGESSGHAM RFISNKGIVA 2760 FKQERGAGAS LVTETHIDTL QGVGDDKAEC RRSNRKRRVK STVAALFQKK MRVEKEREEN 2820 KDDVKEHKDR KLVDQYVTLR RPILQEERKA VMEKVEAFVS DYPTFSCKMT PSVLRNWLRI 2880 PKAFMSLLPQ GSGDVTFIGP NGYRCKLGWL WSPDKRCGFS SGWRQFIRDQ ELQDGDWIVL 2940 EFLKQTVVRV NLFPIVCSSE TCAEGVPLVE TWQAVPRGYR SKDAGGHPLV VRGDNGDTAE 3000 SVMASVGRGS RGWGAADARP GWAADGALEA DPRSRARELD GGMAAEQDVK GRGRGKKQKS 3060 NHNWKISSSN VGSKVSKTEI QKNVGPCKGG RRQGRDEGAS DVGGSSSQKS QQWRDMVEAG 3120 NWCEEYREVE VSLGRAENDK ARTGRGGKFS NLTIQRSQNE LVLRIVGTNC LTDQSSDGIA 3180 KGCTNRRPCG KGKLQASPWT EERILVGDGR ASGKKSRGKV RGAREESTRS VDEGGRNKVN 3240 QVVMQAQLVE NEWVEDSKQN GLARVKNEAA GRRELDNTAP SGFVDVSNAR FGPSAIDGKN 3300 DKKDKKRKRK WRFSSLKTKR RRSLLEKMAK STDEASCGNQ GFVLGGQSVE VTEIAAEHAS 3360 AGGESTRLVR AKKTDQKTDG QRIANMRRRG GEESLPVEER SVLGTGMPSP QVVVKKERCQ 3420 GVVYGSGRKQ ITEGNSDGNL LMSTADRRPR RDAKERDGRP KDQRKQTYAE VRGGEQGPRA 3480 PRKHNHVEEN SSVGKAEGRR SLVRGAVEDR GISGYRDGWI GNGQGDDEEG EYFSVDRMLN 3540 VNWGAGKVLV TLTGLYVSGD SSRYQSGGIW VPKEWLATDF SRVFVPQSWQ LKSHASAIRG 3600 W

Sequence ? help Back to Top

Protein Sequence Length: 3601 aa Download sequence

MGHPGGKSGL EEKKGEEDED VGCQKQGVGN GIARSGDHND GEGAVFSKRT EEGVEEAAVE  60
GNAEMARGED SPYTLTGAQG EEAGSKLEYA TNVSDPGMAH DDSRAGSSDT RSSVQTNRNG  120
KLDSEGGHDG DAKDIGKDSS VNSDKPGSNT DNRCAEDPDG HNNAPGLIAD SIPHRNVGNE  180
SANIDLGTPN SSCVMQSGTI SMISKGRDDG VRARVMGMRV DGGFGNEHGL SGDCNSDSCS  240
KPDLVKADAA MGSVLSVISE CCENVKDTST VDGECGNDND TSVMDDNLCR ASNVSGAGCG  300
VQRRGIRLTG ERADGKEAAC HMVEVNADTV MGTVVASLIC ESEDFKATGA LDNNVGTISD  360
ISVADCLVIR EHSDRGGGQV ADCSTGVFSV NGVGTSVLRD DSEGLASGDG ASSGKVDLAG  420
VACIRSLSGE NVASEEREAG SGSVQLAKRI NDKDSVGCCQ TIPDASVALP VSDAGVAPAH  480
GGIPTKGGID ADPTAVGENE ESKSLEDAAD TLLAGMNSRG ASRVTLPNGE SLEQTKGPGL  540
NVAKAALSLQ TIENGKNAPG KAAGAMEVAD ANESEKIREV AAQVRDGADG TATEDNPTDS  600
MEPVSTGQKT GKNEAVLCGK PSQDSAMVCL GDDGDGDGGK EQTAADVAGA VPGDTVEGTV  660
VHGDRFVPDP QQLMDPRVDG RDHACGVDSS GGIPLMAINN KSSTGDETDS LRDNSVNDRN  720
SCGDGSGGGG GGKQFSSCTS SVNDGDQVDT SNVNKTSAGS AGKRGSISYG DVDPKQVPPC  780
NSSDSQMGGD GVSVSQLTSG NRCERGVESG TGSGAAMFLG MAVAGSQEWT VLDVPRVEGL  840
CDNALSADAM MQHGFAMMHD DNAIDSGDGV VGDSDKCTGV EHAHCGDGDA ALGKNGQTQR  900
PVKSGSRGTC LTGSVKGFAV DSAGRGGGSR NSLCVEVARC GDDVQGAIYS ASHVEAASVI  960
HNDGSAGIDS IASISTGYFS DSCRGQGKLP RVHPDDAGNG VCDQRSLGSN EAGWNGVAGC  1020
AQDAGPATGI CSDDGGATFS PNGTVNTGRE ALQEDKATSG HVPENNDAEA RGCSGGEVTN  1080
RGSSVGMVLS LIHIVAECGE GVMKQGPANG DGVMCHNTKA TEQGAAVNGL VSMPDRKRLC  1140
ADRSEQVSLA RGHAEPDAWR HASAAASSSP TQDLQIVNCQ TCVPAAAELA SNADEGAHLE  1200
GSCVTPSIGD SAIADVDEGA TAQGRDVLDE GKSALSAVAV SLDHDVLVMG SPTQALGGEH  1260
ATPFLEGCRP TRNAKGVDEG EVRLTEHGCI GDPNDGVAKG NDDSLLLDSH APLRSSGDNR  1320
VRNRNCMDGA PCNEDGKAQQ CTACEVVRPS VLALPCSQEG ICDPSKSATG FSQPPKRNDG  1380
GLVGINGRHN SVTCDQIVIV RQHRAPGAEE SPEAGTSGWS DTVVTACLNE SGTDFHASKV  1440
KEGELVCAVN CADGAASDHK NHAGNGHSGN DGAAGAARSL LHYTQIDRHH SNLGVHCACK  1500
PGNHKPLNDC EFANDGAGSG NCIGHADCTG GSDADCQRED YAAVSLTGAL VKPTPEGQDV  1560
GDLKVFGNGD TGNLNSDNIG EGDRRPQPCS GGSGTCVAGS YAPDVSSGSG RESDASVAGI  1620
IDCSEVCADD IPMAVDGCRD THVPLVLGGQ GDSVVARLTE GYGRSSADDG KRNEHVRGGG  1680
TPIRYACNNL SGKSEDLCDQ KCNSTGQILG AMTEIAKREE KPSGVGGGQD DDLGDDHVAT  1740
HAGEAQGKSD GGDVGEDAGC GRSSGPRPVV KDDNAGEEPS SGGGGHGDLL RDCLSCHDLV  1800
ISLFENAECN CAANVPTGET CGRGNSHGLE LEFDEAVNRP PVGDGCHVAT LGNGLAKSHA  1860
RDSEKEGSAS RGEACKSSCS SEPAMSVDRP VEDSVLQGGD HEGGIPQDCC IFGDVVTSSS  1920
WDAERKSQNS DIQQNQICKK RMKSNSPEPT VKGDKAVEAP SLVGGTVEYV PSFDPFCISL  1980
GGDPEAKGAV DVHPCCEERG DLVSIIKAEE SIVEPSVGAN GILADDSPGI SPENCGVDVH  2040
TRRECERIVT PVQVEVANTN VELAPLRAGD NVAVLRENPI FDDPATSPSR IGADLDVLPG  2100
CELSTLGAGD YDEAADTKFL FVRVDDRTIN PLGHDGALGE RRAPSLHSCQ SRRTKKHQNS  2160
FGSIEHGGAG SLCLHPDTLE EVPRTGAVAS KDDSDNVSVT THAQTPAIDS ASAATATAAV  2220
MGNVGGANGG QRESDLIFNA GPTCWSVNTD GMCAPYVQPA NRQHDGGRHN HGSGDSGEDA  2280
KACVAGAASE LAYDGVAQES DIPTGGLQRT VHEERSKFCR TGVELISNST GRAFVGENGC  2340
GKISNGNVGS GSESGLEKHV SVNSVGNGIC VQRSRGKGLH VFLSVKDTSA VEGGQKGGLG  2400
QTGGCCSVDA SQRMLSIAPS FSVRLCPSLK DGTIVINSRH GSTVLSQAVE NDNHTISGRD  2460
EKGIGVAADD GDDGVEVRGE CHSSVYPVAR DLVSVERSDT KGHDSEAAEA DQQHELKQQA  2520
ACTVDDLNKT VSIPYKFQLR LYASSKEAQA AAAHCVRSLE RNRPAIWKQI GKNRRSKSPG  2580
AVALHSMPIY RSWFQKSVLG HVEKGHCEVD VVVEDWEGSR WGMTWHHRKS VLLNGWANLM  2640
NFHSLAFGDF IVFETVGPSL LKIYAFCIGD EEDGHGAIQE QDGDGEYRCG KRLLEARKRL  2700
RQAKRRKAGT VTHPYQQSPD SGLHQSSVIN YEHVHLSACN NEGESSGHAM RFISNKGIVA  2760
FKQERGAGAS LVTETHIDTL QGVGDDKAEC RRSNRKRRVK STVAALFQKK MRVEKEREEN  2820
KDDVKEHKDR KLVDQYVTLR RPILQEERKA VMEKVEAFVS DYPTFSCKMT PSVLRNWLRI  2880
PKAFMSLLPQ GSGDVTFIGP NGYRCKLGWL WSPDKRCGFS SGWRQFIRDQ ELQDGDWIVL  2940
EFLKQTVVRV NLFPIVCSSE TCAEGVPLVE TWQAVPRGYR SKDAGGHPLV VRGDNGDTAE  3000
SVMASVGRGS RGWGAADARP GWAADGALEA DPRSRARELD GGMAAEQDVK GRGRGKKQKS  3060
NHNWKISSSN VGSKVSKTEI QKNVGPCKGG RRQGRDEGAS DVGGSSSQKS QQWRDMVEAG  3120
NWCEEYREVE VSLGRAENDK ARTGRGGKFS NLTIQRSQNE LVLRIVGTNC LTDQSSDGIA  3180
KGCTNRRPCG KGKLQASPWT EERILVGDGR ASGKKSRGKV RGAREESTRS VDEGGRNKVN  3240
QVVMQAQLVE NEWVEDSKQN GLARVKNEAA GRRELDNTAP SGFVDVSNAR FGPSAIDGKN  3300
DKKDKKRKRK WRFSSLKTKR RRSLLEKMAK STDEASCGNQ GFVLGGQSVE VTEIAAEHAS  3360
AGGESTRLVR AKKTDQKTDG QRIANMRRRG GEESLPVEER SVLGTGMPSP QVVVKKERCQ  3420
GVVYGSGRKQ ITEGNSDGNL LMSTADRRPR RDAKERDGRP KDQRKQTYAE VRGGEQGPRA  3480
PRKHNHVEEN SSVGKAEGRR SLVRGAVEDR GISGYRDGWI GNGQGDDEEG EYFSVDRMLN  3540
VNWGAGKVLV TLTGLYVSGD SSRYQSGGIW VPKEWLATDF SRVFVPQSWQ LKSHASAIRG  3600
W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3302	3310	KKDKKRKRK
2	3305	3310	KKRKRK
3	3305	3322	KKRKRKWRFSSLKTKRRR
4	3306	3323	KKRKRKWRFSSLKTKRRR
5	3307	3324	KKRKRKWRFSSLKTKRRR
6	3308	3325	KKRKRKWRFSSLKTKRRR