PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61772.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

C2H2

Protein Properties

Length: 485aa MW: 52383.8 Da PI: 9.5627

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	430	452	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC Cgk+F+ +L++H+ + H GBG61772.1 430 KCLSCGKTFKGYGSLQNHLFSkH 452 7*****************98777 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MEKTAVQVQG KSWADVIRNP VPTIVKELEE RGSENLTGFG KPTGSGNVTS SETGSGNPTG 60 SATDDAEVCK GRPWSQNQSM ASTDDKEGRG VASCRFPTAR CKEGNDEDRR HSNWNVNTDQ 120 NDSEKKAKEK AGKGRSKKVG LEEKSRSASC SFRSSGKGTL DAAAFSPRSP AEETIAQRSQ 180 TGARWPNLPK YWADIAPHGG DMLRPAEGDG VASCRFPRAR YNKTNDQNRS HNNQSFNSDE 240 NGSGNQKKTK AGSSKTLQVE EKTRSTCLSS RSSGKGTADA AASSSCSLAE ERTMSRRSEM 300 GARRLNVATC LADITPPADD TLRLSNTAKG ARTEWLTSSQ AAPCTRYFDA TCLADITPPD 360 DDILRPSNTA LPRDNVGGGS SRVQSLECQS NTRRGEGTAS TTKRKDQDAV FKRSVAEAQK 420 SPLDAHRLVK CLSCGKTFKG YGSLQNHLFS KHDGYNSLSR RAAEAKLLQD LPEMTLMLFK 480 GPAKH

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MEKTAVQVQG KSWADVIRNP VPTIVKELEE RGSENLTGFG KPTGSGNVTS SETGSGNPTG  60
SATDDAEVCK GRPWSQNQSM ASTDDKEGRG VASCRFPTAR CKEGNDEDRR HSNWNVNTDQ  120
NDSEKKAKEK AGKGRSKKVG LEEKSRSASC SFRSSGKGTL DAAAFSPRSP AEETIAQRSQ  180
TGARWPNLPK YWADIAPHGG DMLRPAEGDG VASCRFPRAR YNKTNDQNRS HNNQSFNSDE  240
NGSGNQKKTK AGSSKTLQVE EKTRSTCLSS RSSGKGTADA AASSSCSLAE ERTMSRRSEM  300
GARRLNVATC LADITPPADD TLRLSNTAKG ARTEWLTSSQ AAPCTRYFDA TCLADITPPD  360
DDILRPSNTA LPRDNVGGGS SRVQSLECQS NTRRGEGTAS TTKRKDQDAV FKRSVAEAQK  420
SPLDAHRLVK CLSCGKTFKG YGSLQNHLFS KHDGYNSLSR RAAEAKLLQD LPEMTLMLFK  480
GPAKH