PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG61204.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 500aa    MW: 54368.7 Da    PI: 6.677
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG61204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.42.8e-11270347271
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 
                 W  +e l+L++ +r+++e + ++       k k  +W e++k+m ++g+ +r  + C ++wen+ + y+ki ++ek+ 
  GBG61204.1 270 WHLDESLVLVRCKRDLDEYMASQgsnfarmKTKTWKWNEIAKRMVQQGVtNRDGESCMKRWENIFGWYRKIWDREKDS 347
                 99************887777753222333379999*********9999879**********************99973 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MYGMGSAPTN GXPDGMRQRF DPXLYAHLPS YMQPLPDDED WVPPPSTLPL AWGSTQTSYE  60
TGGRSGDRGT GMGPMSTLLT GGGGAGPDPL QLHLSSSCSM DASRTVLVEH SSRSQGGVSV  120
TMQDARKDGP QTQRPARSSS ACTSSHSRPP GFTTPLGTRV PHAVVNGRVT TPTAAESPQV  180
IERIIARYSR MRTDVQRDDV GDTCADGEDV SEDCTDDDDE SDDDGEPAVK EPTSKGGKKK  240
ASKSRAKSKA REEGGGADGE GGGGSTRQNW HLDESLVLVR CKRDLDEYMA SQGSNFARMK  300
TKTWKWNEIA KRMVQQGVTN RDGESCMKRW ENIFGWYRKI WDREKDSGVQ SFFLLSSKKR  360
KELGFKFVLD RQLYDAMIAI HATTPNNQAI HPPNLHDTGG LPPQQPNEGE QSQPRGPIVV  420
GETSASDNME SGAGDGYGNR SSGGTAAGKR KNARQLAFDV VADVMKTHST IVAESVDRAS  480
KRQCDVLQRQ CDIMEREART
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-06Trihelix family protein