PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG60999.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

CAMTA

Protein Properties

Length: 561aa MW: 62759 Da PI: 4.7669

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG60999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143.7	5.2e-45	36	155	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 +e k+rwl+++e+ ++ n++ h ++l e+++rpksg+l L+++k ryfrkDG+ w+kk dg+tv+E+hekLKv++v++l+cyYa+s+en+ fqrr+ GBG60999.1 36 EEaKRRWLRPREVEYLIRNYRLHAFSLatEPAKRPKSGTLYLFDKKRCRYFRKDGHDWQKKNDGRTVKEAHEKLKVESVDILHCYYARSSENELFQRRS 134 45599***********9998887776699**************************************************************** PP CG-1 99 ywlLeeelek..ivlvhylev 117 ywlL+++ e+ +vlvhylev GBG60999.1 135 YWLLDRKGEEsfVVLVHYLEV 155 *9765434899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MMALPHNESG SGRSRRRSAG SSQDRDSPID VGKVLEEAKR RWLRPREVEY LIRNYRLHAF 60 SLATEPAKRP KSGTLYLFDK KRCRYFRKDG HDWQKKNDGR TVKEAHEKLK VESVDILHCY 120 YARSSENELF QRRSYWLLDR KGEESFVVLV HYLEVTEESG RPPRSLSESA RQSRSAASAS 180 SSVGLIDPVA SYNFGPNVGG NRPGSNTSNN ISAVGTNMHQ TLAAGGLGGG GGGGGGGGGG 240 WVVEGKSWQQ VDSNLGGNRP CSTTDNTKSG VGSDVNQRPL GGGEGGGWAV EGNSWQQEDD 300 EERERRRLND RSATLWKKSA SYKVRDRNMG DDEVSSSGSA EERDDRETVS VGEMDFVLND 360 DNKNVGVAFG SLCIGYYQKE VERVEDVEGE KEEGKKEEEE QTRVSQQQQQ QREDEEDDGK 420 EEDDDDDEAE EEEEEEEETA DLLVPSCELL SCLRFSSMDM LKIKISSRYT TSEPANLFAE 480 YLVHEALEGG WCVRETKRHY GKLVKPITHF ECSLVLVRRI DFNRVVARLE IDLGEDLAPP 540 CDIKQVICTR QWIGILSCDA V

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MMALPHNESG SGRSRRRSAG SSQDRDSPID VGKVLEEAKR RWLRPREVEY LIRNYRLHAF  60
SLATEPAKRP KSGTLYLFDK KRCRYFRKDG HDWQKKNDGR TVKEAHEKLK VESVDILHCY  120
YARSSENELF QRRSYWLLDR KGEESFVVLV HYLEVTEESG RPPRSLSESA RQSRSAASAS  180
SSVGLIDPVA SYNFGPNVGG NRPGSNTSNN ISAVGTNMHQ TLAAGGLGGG GGGGGGGGGG  240
WVVEGKSWQQ VDSNLGGNRP CSTTDNTKSG VGSDVNQRPL GGGEGGGWAV EGNSWQQEDD  300
EERERRRLND RSATLWKKSA SYKVRDRNMG DDEVSSSGSA EERDDRETVS VGEMDFVLND  360
DNKNVGVAFG SLCIGYYQKE VERVEDVEGE KEEGKKEEEE QTRVSQQQQQ QREDEEDDGK  420
EEDDDDDEAE EEEEEEEETA DLLVPSCELL SCLRFSSMDM LKIKISSRYT TSEPANLFAE  480
YLVHEALEGG WCVRETKRHY GKLVKPITHF ECSLVLVRRI DFNRVVARLE IDLGEDLAPP  540
CDIKQVICTR QWIGILSCDA V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-44	CAMTA family protein