PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG60997.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

CAMTA

Protein Properties

Length: 462aa MW: 52320.1 Da PI: 4.7808

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG60997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	148.7	1.5e-46	35	154	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 +e k+rwl+++e+ ++ n++ h ++l e+++rp+sg+l L+++kk ryfrkDG+ w+kkkdg+tv+E+hekLKvg+v++l+cyYah +en+ fqrr+ GBG60997.1 35 EEaKRRWLRPREVEYLIRNYRVHAFSLamEPADRPESGTLYLFDKKKCRYFRKDGHDWQKKKDGRTVKEAHEKLKVGSVDILHCYYAHCSENELFQRRS 133 45599************99998887779***************************************************************** PP CG-1 99 ywlLeeelek..ivlvhylev 117 ywlLe++ ++ +vlvhylev GBG60997.1 134 YWLLERKGQEsfVVLVHYLEV 154 *9865534899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MAPPHHESGS SSSRRRSAGS SQGRDSAIDV GKVLEEAKRR WLRPREVEYL IRNYRVHAFS 60 LAMEPADRPE SGTLYLFDKK KCRYFRKDGH DWQKKKDGRT VKEAHEKLKV GSVDILHCYY 120 AHCSENELFQ RRSYWLLERK GQESFVVLVH YLEVTEESGR PPRSLSESAR RYCSAASASL 180 SASSEEEEEE EEEEEEEEEE EEEEEEDEED EENVGEFEST CELLSLDALP LSPPPILWGE 240 KEDRDPDSHL VSPHDYLQPR HHDNYQEYAA YSYYQEPCSS AHDRTHHSPP SHSHSYGRFR 300 SPRQQHDDPK THHNHYDHHR QQHHQPAPSP PLPPQQKERQ SSSAYWQGPT SSNSGSTMLD 360 KQSWQSSSVS GSLLDWTTSS TQRSMSQLSM TATSQTSTLP NPAMVFSQAM LASAGGYGGS 420 HRSTTIGGDF DDDDDDGDDD GDGDGDGGSD GKEGGGKEIH DY

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MAPPHHESGS SSSRRRSAGS SQGRDSAIDV GKVLEEAKRR WLRPREVEYL IRNYRVHAFS  60
LAMEPADRPE SGTLYLFDKK KCRYFRKDGH DWQKKKDGRT VKEAHEKLKV GSVDILHCYY  120
AHCSENELFQ RRSYWLLERK GQESFVVLVH YLEVTEESGR PPRSLSESAR RYCSAASASL  180
SASSEEEEEE EEEEEEEEEE EEEEEEDEED EENVGEFEST CELLSLDALP LSPPPILWGE  240
KEDRDPDSHL VSPHDYLQPR HHDNYQEYAA YSYYQEPCSS AHDRTHHSPP SHSHSYGRFR  300
SPRQQHDDPK THHNHYDHHR QQHHQPAPSP PLPPQQKERQ SSSAYWQGPT SSNSGSTMLD  360
KQSWQSSSVS GSLLDWTTSS TQRSMSQLSM TATSQTSTLP NPAMVFSQAM LASAGGYGGS  420
HRSTTIGGDF DDDDDDGDDD GDGDGDGGSD GKEGGGKEIH DY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	4e-47	CAMTA family protein