PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG60852.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 495aa    MW: 52403.1 Da    PI: 8.8436
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG60852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.63.1e-082633182383
    trihelix  23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                 r   +  +W++ ++ mr++g++++ + C++kw +l k+ k+i++  ++     s++ +yfd
  GBG60852.1 263 RHMTRCRRWQWTADWMRQEGYSKTGEDCRKKWVELVKKVKEIRDACEG-----SRQQSYFD 318
                 44467789****************************999999987765.....34445665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    
MSTFGRPAMP PIAATSSRQR QYNRSVGGQG WSSATGAGIW GSSEYTRVAP GCNQRSPAMP  60
GFSSISARFG SIRDNAVEGV PSPNLDLQSP QRRLPQGGYQ PCLGPAGVTG QPTFHPQGSL  120
QRAGGDGHLF GGESRNTHAT TPPPMRGSRA SGVERTDAAE EGYMRDTGNH WEFGGDGSED  180
GGGGGKVAAS GAAGSSAGTT GTPFQERAPT NVMPPSTEQR RKAPTPSSKP KKNSPWTLEE  240
RVKLATVAVE DDALMAGAEG PQRHMTRCRR WQWTADWMRQ EGYSKTGEDC RKKWVELVKK  300
VKEIRDACEG SRQQSYFDLT TDEQRKKGVS LTFEKQLWDA MEWYRLKASM RCDNTMASED  360
LRGGGSVLGS EGGSEGGGTD ASDGSAKTRR TSSGKARGGE SAANMHGMAS TMEDSTRVVC  420
EGLDRAVGTL ARATTEGANM MVARMGDMAT GIGVVAGAMQ QGNAVLDMLV GVMAGRGSRR  480
GRGVDEGAET DPSSR