PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG60212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 171aa MW: 19354.6 Da PI: 9.6131 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 30.6 | 8.9e-10 | 81 | 155 | 2 | 69 |
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W +e + Li+ +r ++++++r + ++ +W+e++k++++ + + C kw nl k ykki ++ GBG60212.1 81 WIIEEQMFLIRCKReqdmymaTLDHNYGRMRTREWKWKEIAKRLAALRTVKDADDCFRKWGNLFKNYKKIVGFQG 155 888999999**99967766666777777889**************************************976555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MRTHNDGAGG VGDAVYRDDD DDGDMKDIEA GDDDGDVDIR VLGKRAGRAK GRGRGGGRGR 60 SGGRGGRGGA SKDDDKSATY WIIEEQMFLI RCKREQDMYM ATLDHNYGRM RTREWKWKEI 120 AKRLAALRTV KDADDCFRKW GNLFKNYKKI VGFQGKSGEN DLFRPPNEER K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 45 | 53 | RAGRAKGRG |