PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG60001.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 479aa    MW: 52786.6 Da    PI: 8.7294
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG60001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.88.6e-11325387257
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenl 57 
                 W  +e l+L++ +r+ e+ + +        k k  +W++++k+m+++g++r  +qC ++wen+
  GBG60001.1 325 WNLNESLVLVRCKRDQEDYFANVghnfahmKTKDEKWADIAKRMEKEGVRRDGEQCMKRWENI 387
                 999***********77776665322222338*******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MSMAPIGRGT LLPSVINSAP LYCCPLSCSK ASSSIPCTYR DEHMDDMLRK TALIIFLVGA  60
LLRVFILHVW QVVGTFNRVG RRRGSKKLRQ AASVKIGMGD GYGRGTEGYG IGRGGYAVGS  120
GAEQSVHHRF DPNLYSHLPP HQQSLPDDIT WAPPPSTLDR AWGSTQMSYD TPARVDERRG  180
GLGPMSALLP DVRGGRSLPV DLHLSPSTTM DVSRTVVINE NGQVCRSTSR TMQDAGFDNG  240
ISQLRSNRVP TSVASEPRPV PTLVHRPNVG DDDDEYHEEE EVVVKEATTG GKKKQASKGR  300
GNGKATGKDG GTNGDGGDSG GRANWNLNES LVLVRCKRDQ EDYFANVGHN FAHMKTKDEK  360
WADIAKRMEK EGVRRDGEQC MKRWENIFEW SSANGLSGKR KNDGQLAFEA MTDVMKTHST  420
VVAESVDRAS KRQCDVLQRQ CDIMNREART QERQCIVLEV RQRMLCDTLL KIASALARD