PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG59354.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family AP2
Protein Properties Length: 543aa    MW: 60998.7 Da    PI: 9.7209
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG59354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.33.3e-07135177251
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                  ++GV+  k+  +Wv +Ir+      +  +++lg f ++ eAa+++++a+ 
  GBG59354.1 135 IFRGVY--KTGLKWVTHIRV------NgNTVYLGAFFSEVEAARLYDRAAY 177
                 689**7..43457*******......44**********99********985 PP

2AP230.31e-09327370151
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                 s+++GV+ +  + +W A I++      + k+ +lg+  t+e Aa ++++a+ 
  GBG59354.1 327 SQFRGVYKN--NSKWQAGIKV------NgKQLHLGTVSTEEAAAHLYDRAAY 370
                 789***855..56********......44*********************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MVSIRKKKSI ADLRTKSVKQ EPQSSSQPAS SVVEPAVATP GEGQVVSSSP SEYVQGSPRL  60
FAEQEIIAKR SELSLTPPTG DRASNAVHPD TENSAQSLKK RKRISSIERD HDRTRNREWD  120
GDEPLQPPPN KLQSIFRGVY KTGLKWVTHI RVNGNTVYLG AFFSEVEAAR LYDRAAYICK  180
RPPNFVMTDE EKNALDKLAW DEFLTKTKQE IAILAARQEK KDRNNNSVEP PRRVSHYTGV  240
FSTGRKWVAH IRVDGSTVFL GVVNSEDEAS HLFDRIHTIL LKLQTKCLSA TLRERYPSGR  300
LVPCEMRNGV DQYVHAVDEV KKLKEKSQFR GVYKNNSKWQ AGIKVNGKQL HLGTVSTEEA  360
AAHLYDRAAY ILGRDTNLPI VTAEKEDLDK MTWEEFIAST KGGMLLKRDC RAKLSGRGGA  420
RLKTRGRNTA QCDTEEKRED QPVMVQPERE EVARLSPPVT RRSSIMAGRD RDRECSPAKD  480
SSLRAKRTKT DSAGHGKVQN FDQGSDSSMH FADVNDTANA ADDTESRTRW MISCLVEALE  540
QHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-20ERF family protein