PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT60745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YA | ||||||||
Protein Properties | Length: 315aa MW: 34639.2 Da PI: 9.8355 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 87.5 | 2e-27 | 146 | 200 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p++VNaKQy++Il+RR++Rak e kk k rkpylh SRh hAlrRpRg+gGrF PHT60745.1 146 GPIFVNAKQYHGILRRRKSRAKEME-KKA-LKPRKPYLHLSRHLHALRRPRGCGGRF 200 69*******************9666.555.6*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MTMHTTIFSK GNEGVVQNPV ATLCTAPWWS GGFVSQSMAY AEPFGQVKSA SVEQPPPPKG 60 NATEFTISSG DCKSSANGQK LPNIQTATSV RAANMDYRGH FELGFGQSLI SAKYPYGEQC 120 VGLFSAYSPQ LSGRIMLPLN LASDEGPIFV NAKQYHGILR RRKSRAKEME KKALKPRKPY 180 LHLSRHLHAL RRPRGCGGRF LNTRNMNGTM KDGKTNNTFR ASDVQNFYPT GSQNSEVLQS 240 DSSNLSSPKE TIDSRFYESS GVTNMYSSGN LDPFPFQNLR PLQVQAIPDM MNTGLGILMT 300 DKWVGTADSC CNLKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 4e-31 | NF-YA family protein |