PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60703.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 341aa MW: 38474.6 Da PI: 6.1356

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k+F++ L H +H PHT60703.1 210 YICETCNKVFRSYQALGGHRASH 232 89**********99999998887 PP
2	zf-C2H2	11.9	0.00071	259	281	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H PHT60703.1 259 HECPVCYRVFSSGQALGGHKRSH 281 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEKHKTCKLC SRKFANGRAL GGHMRSHMMN LHTQEKQISH HHHHHHQQQQ QQISDNETES 60 ISLNSWSSED EEKGKILNFA EVGVDDSVVV LPDKESETES SRNPTRFKRS KRVRKSRKSN 120 LLRKVTDYSE TEQPVSSISE TSPEEDVAHC LMMLSRDKWI VQKEQVGDFY SDDDDEEEEE 180 EEEEFKEANN SDDFGVQVKV VAKTRGRGKY ICETCNKVFR SYQALGGHRA SHKKIKVFHS 240 SNNNNEVVEN VVSVEEKIHE CPVCYRVFSS GQALGGHKRS HGIGAGAAAI VSSAKLELSR 300 TGGTSLIDLN LPPPMEDDDE IISQVEVSAV SDAEFINNIK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-46	C2H2 family protein