PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60401.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 376aa MW: 41389.3 Da PI: 5.7717

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.3	8.3e-34	194	248	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGGsekAtPk +l++m+v+gLt++hvkSHLQkYR+ PHT60401.1 194 KPRMRWTPELHEVFVEAVSKLGGSEKATPKGVLKIMNVEGLTIYHVKSHLQKYRT 248 79****************************************************8 PP
2	Myb_DNA-binding	54.3	3.1e-17	196	247	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGg t+k + + m+ +g+t +++ks++qky+ PHT60401.1 196 RMRWTPELHEVFVEAVSKLGGSekaTPKGVLKIMNvEGLTIYHVKSHLQKYR 247 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MNMRRALCIQ RSSEAQHSHM GVSGATSTSS NLIPSQAIPS ASKSRAVGHL LSLTSGPHKD 60 FNFCSTSSQE RNDSNSSGKD AYHDLINFPT NDPVQNGQVE SLAVVMPSDN QAKRSDWQEW 120 ADQLINDDDD VGLGSSWNDI LVDISPPEIK FLETSEVLAC ESHILPSPAA VVAAASSGQS 180 YPVGSPSSTT ALTKPRMRWT PELHEVFVEA VSKLGGSEKA TPKGVLKIMN VEGLTIYHVK 240 SHLQKYRTAR YKPEPSEGTS EKKSTSVIEM PSIFGNRTMG ITEALRLQME VQKQLHEQLE 300 IQRKLQLRIE EQGKYLEMMF EMKDIGKDFK VSSSITDEHP SPSSEPKHSP PNDKSEALEK 360 DPVSLNDRSI TVQESS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MNMRRALCIQ RSSEAQHSHM GVSGATSTSS NLIPSQAIPS ASKSRAVGHL LSLTSGPHKD  60
FNFCSTSSQE RNDSNSSGKD AYHDLINFPT NDPVQNGQVE SLAVVMPSDN QAKRSDWQEW  120
ADQLINDDDD VGLGSSWNDI LVDISPPEIK FLETSEVLAC ESHILPSPAA VVAAASSGQS  180
YPVGSPSSTT ALTKPRMRWT PELHEVFVEA VSKLGGSEKA TPKGVLKIMN VEGLTIYHVK  240
SHLQKYRTAR YKPEPSEGTS EKKSTSVIEM PSIFGNRTMG ITEALRLQME VQKQLHEQLE  300
IQRKLQLRIE EQGKYLEMMF EMKDIGKDFK VSSSITDEHP SPSSEPKHSP PNDKSEALEK  360
DPVSLNDRSI TVQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	6e-80	G2-like family protein