PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT60063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 218aa MW: 25107.9 Da PI: 6.1581 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 21.3 | 3e-07 | 47 | 94 | 183 | 230 |
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLkl 230 + +++d+e+++L+v+pgE la+n++l l +++des+ ++++ d++L++ PHT60063.1 47 SVHTSDVEIKDLNVRPGEPLAINFALVLNHMHDESTGTQNHSDRLLRM 94 348899***************************************997 PP | |||||||
2 | GRAS | 102.5 | 6.2e-32 | 94 | 198 | 259 | 364 |
GRAS 259 ealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357 al+yy ++++s+++ lpr+++eri+vE+++l+r+i+n++ e+a+r+erhe le+Wr+r++ aGFkp++ls+++++++k+ll+++++ y+++ ++g PHT60063.1 94 MALNYYLSVLESIDVALPRDHKERINVEQHCLARKIMNILEYEEAKRVERHELLERWRSRFSVAGFKPYSLSSSINATIKTLLENYYQS-YTLDMKNGV 191 69*************************************************************************************55.********* PP GRAS 358 lvlgWkd 364 l++gW++ PHT60063.1 192 LYFGWMN 198 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MQPLGVYILE GLVARLDSLG SSIYKALKFK EPTSVELFSI CTCFMKSVHT SDVEIKDLNV 60 RPGEPLAINF ALVLNHMHDE STGTQNHSDR LLRMALNYYL SVLESIDVAL PRDHKERINV 120 EQHCLARKIM NILEYEEAKR VERHELLERW RSRFSVAGFK PYSLSSSINA TIKTLLENYY 180 QSYTLDMKNG VLYFGWMNGD ESQFGCFFCL EIVILPEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 2e-60 | GRAS family protein |