PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 258aa    MW: 28458.2 Da    PI: 6.1482
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.11.7e-55801831101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql+sfw++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdiv
  PHT59895.1  80 QLQSFWANQyqeIEHVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 178
                 89******99999************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr++l
  PHT59895.1 179 PREDL 183
                 **987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDHHGNGQPP GIGVITSSAP VYGAPYQANQ MAGPSPPAVS AGTIQSPQAA GLSASSAQMA  60
QHQIAYQQIH QQQQQQLQQQ LQSFWANQYQ EIEHVTDFKN HSLPLARIKK IMKADEDVRM  120
ISAEAPVVFA RACEMFILEL TLRAWNHTEE NKRRTLQKND IAAAITRTDI FDFLVDIVPR  180
EDLKDDVLAS IPRGTLPVGG PTEGLPFYYG MPPQSAPPMG APGLYMGKPV DQALYAQQPR  240
PYMAQPIWPQ QQQPPSDP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153159RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.31e-80NF-YC family protein