PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT59825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 1044aa MW: 115440 Da PI: 5.1688 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 9.8e-41 | 150 | 227 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C +dls+ak+yhrrhkvCe+hska+ +lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+q+ PHT59825.1 150 VCQVDDCGTDLSKAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNKRRRKTQS 227 6**************************************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1044 aa Download sequence |
MEASVGERFY HMGGPDLRGL GKRSLEWDLT DWKWDGDLFI ATPLHQNAPN YQSRQFFPVE 60 TGNLASSNSS SSCSEEVNHG MEQQRRELEK RRRVIVVEED DSGPLSLKLG GQGEPAAASA 120 DAGGRELGGN WDGAAGKRTK LVAPAGSRAV CQVDDCGTDL SKAKDYHRRH KVCEMHSKAS 180 RALVGNVMQR FCQQCSRFHA LQEFDEGKRS CRRRLAGHNK RRRKTQSESV ANNNSVNEGQ 240 TSGYSLMSLL KILSNMHSNG TNPTEDQNLL SHLLRSLASQ GTTNGDKSLS GLLQESSNLL 300 NNRSILRNPE IASLISNGSQ APPRAKEHQF TNSATEMPQK RLDVHDVRLE DARTASSQSP 360 GILFPIQSNS QAYTPGREST TGRSKLMDFD LNDAYVDSDD CGEDLVRSPV PECPSWLQQD 420 SHQSSPPQTS GNSDSASAQS PSSSSGDNQN RTDRIVFKLF GKDPSDFPFV VRAQILDWLS 480 HSPTEIESYI RPGCIVLTIY LRLPESAWEE LSYNLSSSLS RLLDVPGGDS FWTRGWIYIR 540 VQNQIAFVCD GQVLLDMSLP YVSNDDSTLL SVRPIAVPVS GRVQFLVKGY NLTKPSTRLL 600 CALDGSYLVP EANNEVEEHG DVVDKDDKIQ SLNFTCSVSA VAGRGFIEVE DHGVNNSFFP 660 FIIAEEDVCS EIRMLESDLE LSSSDYVNGQ TSNMEARNQA MDFIHELGWL LHRNNLKARL 720 DHFGPNAVLY PLKRFKWLVD FSVDHDWCAV VKKLLNILLD GTVGAGDNSF LKFALSELGL 780 LHRAVRRNSR PLVELLLTYT PESVADELCS EYQSQVGIDG EFLFRPDCVG PAGLTPLHVA 840 ACIDGYEDVL DALTDDPGMV AIEAWKNTRD GAGFTPEDYA RLRGHYSYIH LVQRKISKKA 900 TSGHIVVDIL SVPAVVESNN QKDEVYTTTS LEITMTERTP IARPCGLCDR KLAYGSRGRS 960 LLYRPAMFSM VAMAAVCVCV ALLFRGSPEV LEAKDLTGMA LDELVGNLRT YEMKIDGTNE 1020 QEAPKKVLAL KASDSDDEVE LDQE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 90 | 94 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |