PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT59070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SRS | ||||||||
Protein Properties | Length: 223aa MW: 24818.5 Da PI: 8.3979 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 189.1 | 1.6e-58 | 13 | 154 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 s +++CqdCGnqakkdC+++RCRtCCksrg++C+thvkstWvp++ rr r++ ++++ +++++ +a ++ kr s+ s++ + ++ e PHT59070.1 13 SSSSRCQDCGNQAKKDCTYMRCRTCCKSRGYHCETHVKSTWVPVSTRRPRHHLHHSTIQQQQQ-LIQAGPNPKRYR-----SNESHQVIGGGD----QE 101 56789********************************************97777766555443.433333333332.....233333344443....35 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + ++P evss+avfrc+rvss+d++ +++aYqt+v+i+Gh+fkGiLydqG+++ PHT59070.1 102 AGDFPVEVSSAAVFRCIRVSSIDNAVDQYAYQTSVKIAGHIFKGILYDQGPDD 154 788************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MMRRSEEEGI SSSSSSRCQD CGNQAKKDCT YMRCRTCCKS RGYHCETHVK STWVPVSTRR 60 PRHHLHHSTI QQQQQLIQAG PNPKRYRSNE SHQVIGGGDQ EAGDFPVEVS SAAVFRCIRV 120 SSIDNAVDQY AYQTSVKIAG HIFKGILYDQ GPDDHESPRY SNINTNNMAG ESSSTGFQLQ 180 QSPNLPITTA TTSPHPPAST YPNLLFSALN MPGTQFFQYP KSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 6e-47 | SRS family protein |