PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT59068.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 212aa MW: 23493.2 Da PI: 6.2178

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT59068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.2e-08	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++++e++ +C+ ++ lC+ C + H+ PHT59068.1 4 QCDVCDKEEASVYCTADEATLCQRCDYQVHHA 35 7***************************9743 PP
2	zf-B_box	28.9	2.3e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ lC++C l +H+ Ht PHT59068.1 55 SPLCDICQERRALLFCKEDRAILCKECDLPIHRAneHT 92 689*****************************768865 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MKIQCDVCDK EEASVYCTAD EATLCQRCDY QVHHANKLAS KHLRFSLVHP SFKDSPLCDI 60 CQERRALLFC KEDRAILCKE CDLPIHRANE HTQKHNRFLL TGVQLSSAVL ATYNNNQTSS 120 SSMSPTGSEA SNAGTNNLKA RSGNSGMKSN SISTTDQSTP DYFQVDCIQE GSVSAGSISE 180 YLIETLPGWH VEDLLQYPCS SQYGKDLTYI HG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	1e-67	DBB family protein