PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59049.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 400aa    MW: 44503.7 Da    PI: 8.4545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.53.3e-08249294554
         AP2   5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 
                 G+r+ k + r+ + I d    + ++k+++lg+f t eeA +a+   + ++e
  PHT59049.1 249 GIRRQK-NERYGVVIID----KiRNKQIWLGTFNTVEEASQAYFYKKFEFE 294
                 899777.8****99999....4446******************98888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MVYGQVEAFF ESQELHEIVG DMGEASAGSS YPVPFIIPDD PPYSSPTWVS KARPTNVKLA  60
GAREGLSSIS SKKDMMLVFL TIVTRMRRGI DIQASSGKSM ISWKAVMAHE PNEGLDLIRN  120
SKLPDPIVEM LDSVGMSFET VNMVIYRLIG KGIMDRRQLT LKGKQPESPS VQCLSVANDQ  180
IQQPESPSEQ CLSVDNNQTL DTANGTESSN KCNTTSSFLP TDKKILLGIR RQKNGRYGDV  240
ITNKGNLLGI RRQKNERYGV VIIDKIRNKQ IWLGTFNTVE EASQAYFYKK FEFEKLSQQG  300
NKENKAKENL DQIQQPELPI IQCLSVAIDP TLDTTSVTRI NFHEKTDFLK VHKNSMSGKE  360
NESSKETPCL MASVHGTKSS VECNASTNCS PKGKINLIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.19e-09ERF family protein