PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58814.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 277aa    MW: 30693.8 Da    PI: 7.2961
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-16102151255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr +  +g+Wv+eIr p++   + r++lg++  ae+Aa+a++ a+++++g
  PHT58814.1 102 TYRGVRKRN-WGKWVSEIRQPRK---KSRIWLGTYPRAEMAARAHDVAALAIKG 151
                 69****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEDHHHEFSI SSSTSTTSSS FTSCSNNCLS SPSTTTCCST SSTSSNCFHE SIAKSTSNCK  60
SKKSSKKVDQ DFTKNNGNCH GNEDSKKIRR KIEGGVDEKH PTYRGVRKRN WGKWVSEIRQ  120
PRKKSRIWLG TYPRAEMAAR AHDVAALAIK GNSAYLNFPH LADQLPRPAS TSPKDIQAAA  180
AKAAAASTFL EENSIDSSQL IELHSSHSST NLASQNTQGL LNSPSMDHDD TFFDLPDLTI  240
DRVDQSDRYE YPISTWQLAG ADSGLFRLEE PFLWECY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-58ERF family protein