PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT58624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | G2-like | ||||||||
Protein Properties | Length: 214aa MW: 23945.1 Da PI: 9.5503 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105 | 4.2e-33 | 23 | 77 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl PHT58624.1 23 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 77 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 68.2 | 1.4e-21 | 25 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ PHT58624.1 25 RLRWTADLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 76 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MDRMYNGGGD GYENGVVMTR DPKPRLRWTA DLHDRFVDAV TKLGGPDKAT PKSVLRLMGL 60 KGLTLYHLKS HLQKYRLGQQ AKKQNAAEQN RENIAAESFG QFSLHSSGPS ITSSSMNGMQ 120 GEAPISEQLR CQFEVQKRLQ EQLEVQQKLQ MRIEAQGKYL QAILDKAQKS LSIDMTSPRA 180 VDETKAQLTD FNTALSNLMD YMHGVNRDET AAGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 5e-55 | G2-like family protein |