PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58587.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 475aa    MW: 53871.2 Da    PI: 4.2876
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.61.9e-1721522127
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekew..yfFskrdkkyatgkrknra.............. 77 
                   G+rFhPtd+el+  +L + +++k+l+ +  i+e d+yk ePw           + + ++++   yf ++ +k++ +  rk+++              
  PHT58587.1   2 EEGYRFHPTDSELL-AFLLRFIAEKDLRDDGYITEHDVYKQEPWVTYGcgchcggE-DDGDTSSyrYFITPMHKNKIK--RKKKSlgddkkkdrfcriv 96 
                 67************.89999******999889************997446654431.223333323777666655443..3333334556666667777 PP

         NAM  78 .tksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127
                   k g+Wk++ k k+v+ +      k+  +g kk+L +   ++  +   +W+m+ey 
  PHT58587.1  97 gEKLGTWKQKDKGKNVIMTsfgnqsKSLIIGRKKSLCYE-TTRCCPDDGKWLMKEYV 152
                 7779********99998877876544445********97.56666789********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MEEGYRFHPT DSELLAFLLR FIAEKDLRDD GYITEHDVYK QEPWVTYGCG CHCGGEDDGD  60
TSSYRYFITP MHKNKIKRKK KSLGDDKKKD RFCRIVGEKL GTWKQKDKGK NVIMTSFGNQ  120
SKSLIIGRKK SLCYETTRCC PDDGKWLMKE YVFCEIILNQ FSKSKFRDYV ICAIKRKSQK  180
NSSNGTRCSN RTTIMDTEVE SEVNSVEPLM DLKYNALTPI QVDSMVESEV QIQGAASEEN  240
NVVLGITTTT QIQEHNDLEI MDISDQDFEM ISSISVAENL MLEFDEFKAK IQEADGEENG  300
IWGIQEFENA SPEINLPNFL ELLSGDADYC STSNHVEIQE AHGEENGQLE LCTSSQIQEP  360
VIPDFANLNS QLNMPDFFDT LPEYVGVAEF MDAYYELISP FDFSKQGTAE SNEPRVQTQE  420
ADGEVNGPLG LTAPFSQIQE SVVPENNVPE TFDMGGTLLL KNQTQQQHQE FCAVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
177106KRKKKSLGDDKKKDRFCRIVGEKLGTWKQK
278107KRKKKSLGDDKKKDRFCRIVGEKLGTWKQK