PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58568.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Trihelix

Protein Properties

Length: 316aa MW: 36728.1 Da PI: 4.9715

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.8	3.6e-10	17	84	2	69
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 Wt +e l+L++ r+++ + +++ + ++W++ + + ++g++rs +qCk++we++ +y k+k +e PHT58568.1 17 WTLHESLTLVNEMRSTQIECGNTLASFQKWQSTVQSCNSQGVNRSLNQCKKRWESMLEQYNKVKPWEM 84 ****************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MEKTSGLRTR SQAAPDWTLH ESLTLVNEMR STQIECGNTL ASFQKWQSTV QSCNSQGVNR 60 SLNQCKKRWE SMLEQYNKVK PWEMAYWSDF DEERKRELEL PEEFDCELFK GIESYLSCLE 120 GEDGAGADTD PDTDPEAQQV PGNNAFFEIG PKRRRRRTKT KRYKMEERLN PWRHILNENR 180 KYEQSKMGIK HEGSIDTNLE APRHETSRLE MKRETSSLEE KAELPNLSMV SEVKVEQTNI 240 DNPEEMMAAT LRENAEMITA IIEGNPMDDR DCRPADFKNF EDGRVRLIRS QGNQLIDCLG 300 KISDTLSQFY DAIHKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	157	KRRRRR
2	153	158	RRRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-30	Trihelix family protein