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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PHT58260.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | NAC | ||||||||
| Protein Properties | Length: 334aa MW: 37805.1 Da PI: 5.2403 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 171.9 | 1.9e-53 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
lppGfrFhPtdeelv +yLk+k++g ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nratksgyWkatgkd++v++ +
PHT58260.1 6 LPPGFRFHPTDEELVGYYLKRKTDGLEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDLEWFFFCPRDKKYPNGSRTNRATKSGYWKATGKDRKVVC-HP 102
79****************************.99**************95334445667**************************************.99 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
e+vg +ktLvfy+grap g +tdWvmheyrl
PHT58260.1 103 EVVGYRKTLVFYRGRAPLGDRTDWVMHEYRL 133
9****************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MAGTSLPPGF RFHPTDEELV GYYLKRKTDG LEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DLEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKVVC HPEVVGYRKT LVFYRGRAPL 120 GDRTDWVMHE YRLCDDATQG TPSFQGPFAL CRVIKRNDVS LKTKDVQGVK QVGCSSTAGR 180 FTSVNEPIAL SDETPTQSTY MSNDSNYSTP IASPYQTTQL GDYESAIAAN SANLWMPPSM 240 ILDSSKECPQ GLNASSYCPQ YDFPNMTPWQ PNEFTSNSTF PDFRGEVELS GDLSNFGCMS 300 PYSIHGSYMG FYGNEDTTYE GFDQSNSNRN PNHF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17980.1 | 1e-100 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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