PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58136.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 306aa    MW: 35345.5 Da    PI: 6.8507
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.65.6e-4171131106
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeelv++yL+kk+++k+++l +vike+d+yk+ePwdL++  ++ +e+  ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++++ k
  PHT58136.1   7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKEIDLYKIEPWDLQElcRIGSEDPsEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYR-K 103
                 69****************************.9***************954455554446**************************************.8 PP

         NAM  97 gelvglkktL 106
                 + l+g++ktL
  PHT58136.1 104 HCLIGMRKTL 113
                 999******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MNSFTHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCRIGS  60
EDPSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YRKHCLIGMR KTLEEGWAVC  120
RVFKKKLATS IRGEGEQYQQ ESLCWYNNEQ LVSNFIPDFD SPRRNNFPNI PYNTTPSYHH  180
QLPYTNMQPH NNDALFLQLP QLESPKIPQS YHGINQINIA QPNSIYNNYD NQAVDQVTDW  240
RVLDKFVASQ LSQQDGTAAA CSSSPASHEQ QMNLLQDDSI NKGTEMASSE IASLSASSSQ  300
LDHLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.16e-97NAC family protein