PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT58134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | YABBY | ||||||||
Protein Properties | Length: 195aa MW: 21948.9 Da PI: 8.4106 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 218.1 | 2.7e-67 | 17 | 180 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsen 104 seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhC++ll l +++ +h+++s+ + ++ l+ ++++ +++ ++ ++ + PHT58134.1 17 PSEQLCYVHCNNCDTVLAVSVPCTSLFKTVTVRCGHCANLLPGWLLPSTNHHHQLHHFGHSYFSPSHNLLEEISNATPNFLMNQGNSAHDFVLP--ARP 113 69****************************************9999999999999999999887755555444444444444444433333332..356 PP YABBY 105 edeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++pr+pp ++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+i fgl PHT58134.1 114 GFDDLPRPPPvINRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIQFGL 180 6789999999789****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MSSSNSLSLD HLPLPPPSEQ LCYVHCNNCD TVLAVSVPCT SLFKTVTVRC GHCANLLPGW 60 LLPSTNHHHQ LHHFGHSYFS PSHNLLEEIS NATPNFLMNQ GNSAHDFVLP ARPGFDDLPR 120 PPPVINRPPE KRQRVPSAYN RFIKEEIQRI KAGNPDISHR EAFSAAAKNW AHFPHIQFGL 180 MTDQTVKRTN VRQQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 4e-59 | YABBY family protein |