PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 24626.3 Da PI: 10.0461 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.8 | 3.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifss+gklye+ss PHT57921.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSSRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 59.9 | 1.1e-20 | 87 | 173 | 12 | 98 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++e+l++e+a + +++e L+ ++R+llG++Les +l eL+q+e+qLe++l++iR++Kn l++eqi +l++ k l +en +L+k+ PHT57921.1 87 LTTEHLKEEIATMTRKLEFLEDSKRKLLGQGLESSTLDELEQVEEQLERGLSNIRARKNLLFREQIAQLKEEGKILLKENADLKKRS 173 5689*******************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRGKTQLKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSS RGKLYEFSSS 60 STHKTIERYQ KNDKSLGQFN RKLPDQLTTE HLKEEIATMT RKLEFLEDSK RKLLGQGLES 120 STLDELEQVE EQLERGLSNI RARKNLLFRE QIAQLKEEGK ILLKENADLK KRSEMLSLTL 180 TTIAKEKKDD GRQIMEVETE LFIGLPDTRK NSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 1e-67 | MIKC_MADS family protein |