PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57876.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 299aa    MW: 33692 Da    PI: 8.4497
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-18110160256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  PHT57876.1 110 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 160
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDKFQENNTM SSIYDEGARI RSSLSQLILT SGTNTFDTIF SHCQETNQMA STSPVFEPLG  60
SSVYLRQRDL LHKFCQENIA NIPLPTTSKT SPFRNSLYTQ GYNFQEKKKL YRGVRQRHWG  120
KWVAEIRLPQ NRMRVWLGTY ETAEAAAYAY DRAAYKLRGE YARLNFPNVR DPSKLGFGDG  180
ERMNAVKNAV DAKIQAICQK VKREKAKKAA KKKSENESKV KETMDSSSST TTTSSLVGGC  240
GDVISPSVSE DGLWKSEDST CSVFGDCLKE PLMESEFDSC SLARMPSFDP ELIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.19e-62ERF family protein