PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57061.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 398aa MW: 44928.3 Da PI: 6.5201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.6	2e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yLk+kv++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PHT57061.1 14 MLPGFRFHPTDEELVGFYLKRKVQQRSLPI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSdSTK 111 579*************************.89***********9888999***********************************95566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra +g ktdW+mhe+rl PHT57061.1 112 CIGLKKSLVFYRGRAARGIKTDWMMHEFRL 141 6*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MDDKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKVQQRS LPIELIKQVD IYKYDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDST KCIGLKKSLV 120 FYRGRAARGI KTDWMMHEFR LPTTNSESAP PKKFLDKNFP PNDSWAICRI FKKTNSMANR 180 ALSYPWVNPL SEVASPELFN QSATAHFGSE NVSTITETGS VLHLSSNNDI LQGVSHVPSY 240 KVLNNMVSRP SYLSSPSTDI SCNFVFSSSP EVSGQNNRCL LDVNSMFFNT SPGLITDISK 300 TSETIDFEGP NQQLNSFSIS SSQEMQKSIS MEEHEAGLTS NQTSINDNIA EWENIRSVGF 360 PFSLTTSLAD EWKPSLSWDS PSRPSEISTA YSTSKCYT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MDDKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKVQQRS LPIELIKQVD IYKYDPWDLP  60
KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDST KCIGLKKSLV  120
FYRGRAARGI KTDWMMHEFR LPTTNSESAP PKKFLDKNFP PNDSWAICRI FKKTNSMANR  180
ALSYPWVNPL SEVASPELFN QSATAHFGSE NVSTITETGS VLHLSSNNDI LQGVSHVPSY  240
KVLNNMVSRP SYLSSPSTDI SCNFVFSSSP EVSGQNNRCL LDVNSMFFNT SPGLITDISK  300
TSETIDFEGP NQQLNSFSIS SSQEMQKSIS MEEHEAGLTS NQTSINDNIA EWENIRSVGF  360
PFSLTTSLAD EWKPSLSWDS PSRPSEISTA YSTSKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein