PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT56985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28435.3 Da PI: 10.0212 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89 | 2.5e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl+eys+ PHT56985.1 9 KRIENKISRQVTFSKRRCGLLKKANEISVLCDADVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 97.6 | 1.8e-32 | 80 | 174 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ e+++ e+ kL ++ e Lqr++Rh++G+dL++Lsl+eLq+Le q+++slk+iRs+Kn+l++e+i+elqkkek+l+e+n+ ++kkl+e PHT56985.1 80 MNPIDSDPKENWNLEYPKLMSRAELLQRNIRHYMGQDLDPLSLRELQSLELQIDTSLKRIRSRKNQLMHESISELQKKEKALHEQNNLINKKLKE 174 5556677789**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGRVELKR IENKISRQVT FSKRRCGLLK KANEISVLCD ADVALIVFST KGKLFEYSTD 60 SSMESILERY ERYSYAERKM NPIDSDPKEN WNLEYPKLMS RAELLQRNIR HYMGQDLDPL 120 SLRELQSLEL QIDTSLKRIR SRKNQLMHES ISELQKKEKA LHEQNNLINK KLKEKQKTQP 180 NSGQNSATFH VPPSHSHHQL VPNLSIGGAF GGTREMNIDG SGQAAYPGSN NNSTLMPPWM 240 LRHVSNEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 3e-81 | MIKC_MADS family protein |