PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56934.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 369aa MW: 41615.1 Da PI: 8.2102

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.9	2e-32	240	295	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGG+++AtPk+i+++m+v+gLt+++vkSHLQkYRl+ PHT56934.1 240 KQRRCWSPELHRRFVDALHQLGGAQVATPKQIRDIMQVDGLTNDEVKSHLQKYRLH 295 79****************************************************97 PP
2	Myb_DNA-binding	44.9	2.6e-14	242	293	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I m+ g+t ++ks++qky+ PHT56934.1 242 RRCWSPELHRRFVDALHQLGGAqvaTPKQIRDIMQvDGLTNDEVKSHLQKYR 293 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGSNSREMDI DLNFIYVPKI ISDVLTEISA MDDISKKLIK LNQFIVALEE ELRKIEAFKR 60 ELPFCMVLLK DAIERLKEEA LQYKGKDKKP AMEKFISLKK GNSDESGRVK KSNDLNDKKN 120 WMSSAQLWST PVQYEQSYDL EKQGPFLHLN SGGVEEKNKE KEYQLGVHKL KSDRGAFLPF 180 QGQTLKEGKN GLPVKDLSLC MAVTVAEGQK GQNPIDLSVK NDNGTSNGCS FLQDKSQQRK 240 QRRCWSPELH RRFVDALHQL GGAQVATPKQ IRDIMQVDGL TNDEVKSHLQ KYRLHVRRVP 300 VSGCSWSNMD EIGELSKTNG TQSGSPEGPL HFTGSGSAKG LSMNEEEDNK SESYTWNGQH 360 QKSNIEAHV

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGSNSREMDI DLNFIYVPKI ISDVLTEISA MDDISKKLIK LNQFIVALEE ELRKIEAFKR  60
ELPFCMVLLK DAIERLKEEA LQYKGKDKKP AMEKFISLKK GNSDESGRVK KSNDLNDKKN  120
WMSSAQLWST PVQYEQSYDL EKQGPFLHLN SGGVEEKNKE KEYQLGVHKL KSDRGAFLPF  180
QGQTLKEGKN GLPVKDLSLC MAVTVAEGQK GQNPIDLSVK NDNGTSNGCS FLQDKSQQRK  240
QRRCWSPELH RRFVDALHQL GGAQVATPKQ IRDIMQVDGL TNDEVKSHLQ KYRLHVRRVP  300
VSGCSWSNMD EIGELSKTNG TQSGSPEGPL HFTGSGSAKG LSMNEEEDNK SESYTWNGQH  360
QKSNIEAHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	3e-55	G2-like family protein