PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT56933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | LBD | ||||||||
Protein Properties | Length: 318aa MW: 35588.1 Da PI: 7.8973 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 137.5 | 4.6e-43 | 13 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lq++l+q++ +l ++k+ PHT56933.1 13 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNAAQREDAVNSLAYEAEYRLRDPVYGCVGLISLLQHKLKQVQDDLLAAKK 111 7********************************************************************************************999887 PP DUF260 100 e 100 e PHT56933.1 112 E 112 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
FFRNRRMSSS SSPCAACKFL RRKCTQECVF APYFPPDQPQ KFANVHKVFG ASNVAKLLNE 60 LNAAQREDAV NSLAYEAEYR LRDPVYGCVG LISLLQHKLK QVQDDLLAAK KELTNYIGPS 120 AMLPVNLQPP GFIPQHHMNV PSSSTMMPFN MNPILGMPTG VPQGGQLMIP DPQQQQQQTI 180 EAQQFAAALA AREQREQQEM LGNYEQQQQQ QQHPSQQHDI LRFHSGLDST SSVTATGFHQ 240 MSSPISPSLV LVGTPENPHN LFPPTGQHGH SYPSYQERQL QSQLLLQQQQ PPPQQPETPR 300 QQQRAKSQEE ARSTGPSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 5e-68 | LBD family protein |