PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56761.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 451aa    MW: 50995.4 Da    PI: 5.7711
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3074.5e-94594482373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaN 99 
                 ++lL++cA+a++s+d +laq++L+ l+++a pdgd++qRl+  f++AL  r a+   +++k l+++ +++++ ++ ++  l  f++++P+++f++ +aN
  PHT56761.1  59 EQLLVHCANAIESNDSTLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIVRAAK--IGTCKLLTANLNHSMEtHKFSIIELASFVDLTPWHRFGFTAAN 155
                 79****************************************************..666766666655544436666666677**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrled 188
                  aIleaveg + +Hi+Df++++++Q p+L++a++sR egpp +++T+ g+ e        ++ee+g +L +fA++ +v +ef+v+            ++
  PHT56761.1 156 GAILEAVEGYSIIHIVDFSLTHCMQIPTLIDAISSRLEGPPLVKLTVAGATEDLppmLDLSYEELGAKLVNFARSRNVMMEFRVIpssssdgF----SN 250
                 **************************************************776698888999**********************977633333....33 PP

        GRAS 189 leleeLrvkp......gEalaVnlvlqlhrll..........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                 + +e+Lrv++      gEal++n++++lh+++           ++ +++s r+ +Lk++++l P++vv+v+++ad +s++++ r+ +a++y +  +d++
  PHT56761.1 251 V-IEQLRVQNlirpenGEALVINCHMMLHYIPeettllsnrfTSECTTNSFRTMFLKAIRNLDPTIVVLVDEDADFTSNNLVCRLRSAFNYLWIPYDTV 348
                 3.66666666666678****************88888888877777778899*********************************************** PP

        GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                 ++ lpr s++r+++E+  + ++i+nv+a+eg +r er e +++W +r+++a +++  +se+a++++k +l +++  g+ ++ e++ lvl+Wk++++v++
  PHT56761.1 349 DTFLPRGSKQRQWYEAD-ICWKIENVIANEGVQRLERLEPKSQWVQRMRNANLRSSGFSEEAVMEVKNMLDEHA-AGWGLKREEEDLVLTWKGHNVVFA 445
                 *****************.********************************************************.8999******************** PP

        GRAS 371 SaW 373
                 +aW
  PHT56761.1 446 TAW 448
                 *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MMQFTESLPP SLHQQVSPFS NLMMNKNSST NNQIQRARPW PGFHTPKNLG NIGDTNCMEQ  60
LLVHCANAIE SNDSTLAQQI LWVLNNIAPP DGDSNQRLTC GFLRALIVRA AKIGTCKLLT  120
ANLNHSMETH KFSIIELASF VDLTPWHRFG FTAANGAILE AVEGYSIIHI VDFSLTHCMQ  180
IPTLIDAISS RLEGPPLVKL TVAGATEDLP PMLDLSYEEL GAKLVNFARS RNVMMEFRVI  240
PSSSSDGFSN VIEQLRVQNL IRPENGEALV INCHMMLHYI PEETTLLSNR FTSECTTNSF  300
RTMFLKAIRN LDPTIVVLVD EDADFTSNNL VCRLRSAFNY LWIPYDTVDT FLPRGSKQRQ  360
WYEADICWKI ENVIANEGVQ RLERLEPKSQ WVQRMRNANL RSSGFSEEAV MEVKNMLDEH  420
AAGWGLKREE EDLVLTWKGH NVVFATAWIP L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein