PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56647.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 305aa    MW: 35019.5 Da    PI: 6.354
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC112.72e-35541552100
       NF-YC   2 lksfwekqiekatd..fk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                 l  fw++q e+     +k +helP++ri++ +k++++vkm+sa++ vll+ka e+filelt r+w+++e+ krrtlk++dia a+ + + fdfl divp
  PHT56647.1  54 LSCFWKRQKEEILHsvLKrKHELPISRIRRAMKSNDQVKMVSAHSTVLLAKAIEMFILELTRRAWMQSEQEKRRTLKRCDIARAIRNEELFDFLSDIVP 152
                 778*****888654224459******************************************************************************9 PP

       NF-YC  98 rde 100
                  ++
  PHT56647.1 153 LQN 155
                 876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDFNSSSMEL PKSSSALSSD MQRPVHMQKS MPSDKKIQQD EDERDPRFML KEELSCFWKR  60
QKEEILHSVL KRKHELPISR IRRAMKSNDQ VKMVSAHSTV LLAKAIEMFI LELTRRAWMQ  120
SEQEKRRTLK RCDIARAIRN EELFDFLSDI VPLQNYKVQE AANDGQGNEL HPAHQMVKPN  180
NNSVHAEAND GQGNEFRPTH QLVQPNNIPV QQQTNDGQGN MFDPAHQFVQ PNNSPYQFQV  240
KEAANGGQGN EFHPVYQMVQ PNNIPASFTS TQGIPAPLMS PPLFNFSPED EFIIDGFLMD  300
YREGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128132TLKRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.27e-34NF-YC family protein