PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56327.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 632aa MW: 72533.4 Da PI: 6.3507

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.3	1.2e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k+++kk+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++ PHT56327.1 6 LPPGFRFHPTDEELVAYYLKRKINNKKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QT 102 79**************************.99***********6434555777**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+y+grap+g +tdWvmheyrl PHT56327.1 103 RAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKINN KKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEV ANGLQDAYAL CRVIKRSLNN NGPKIGEQYY GRAAISDRSS 180 SIDQVYSEGR GDLHDIESSH DHEYGIMPSS SSSSMAVHGS PINTNASAPT DDRWMQYLSN 240 EAFTFNNTNA AQPIPNYGTL PLPPSKVDIA LECARLQHRF TLPSLEIQDF PQVGYVDHDA 300 KMPQSSFINQ DSWGGNSNLC APIDDFSFLI PPNNNQIHHD LSSFNFMEQD DNVIRSIDIG 360 DFDHEDFKSD RMVENLRWIG MSNRDLEKKF FEDYKTVPID NVSSVQRDHE FQGENSGQNN 420 SFNSGLNETE ANNFSMGFGN DNLLGDGDVT DGFSSCPSFQ VYGKIEVNHG FFIATRQASK 480 TFYHQVTPSR TLTIHRNLVP LHDFPKNRAP HDNFVTKVTR PWTTTMRTLV GMVAILQTLW 540 LYVGECLELE EKGFKLEDKK GVYEECCLIE RVEKKKVEDF KWDIYKQSKF PFGDKDEGIK 600 YCCYLEKKWP NYLTLVVALS RIWLHHIIVP SF

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKINN KKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEV ANGLQDAYAL CRVIKRSLNN NGPKIGEQYY GRAAISDRSS  180
SIDQVYSEGR GDLHDIESSH DHEYGIMPSS SSSSMAVHGS PINTNASAPT DDRWMQYLSN  240
EAFTFNNTNA AQPIPNYGTL PLPPSKVDIA LECARLQHRF TLPSLEIQDF PQVGYVDHDA  300
KMPQSSFINQ DSWGGNSNLC APIDDFSFLI PPNNNQIHHD LSSFNFMEQD DNVIRSIDIG  360
DFDHEDFKSD RMVENLRWIG MSNRDLEKKF FEDYKTVPID NVSSVQRDHE FQGENSGQNN  420
SFNSGLNETE ANNFSMGFGN DNLLGDGDVT DGFSSCPSFQ VYGKIEVNHG FFIATRQASK  480
TFYHQVTPSR TLTIHRNLVP LHDFPKNRAP HDNFVTKVTR PWTTTMRTLV GMVAILQTLW  540
LYVGECLELE EKGFKLEDKK GVYEECCLIE RVEKKKVEDF KWDIYKQSKF PFGDKDEGIK  600
YCCYLEKKWP NYLTLVVALS RIWLHHIIVP SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-127	NAC family protein