PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56065.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 273aa MW: 30910.6 Da PI: 5.1405

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.1	5.3e-35	40	97	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + lkcprCds ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrnvPvGggr++++ PHT56065.1 40 PEPLKCPRCDSINTKFCYYNNYNKSQPRHYCKGCKRHWTEGGTLRNVPVGGGRKNKRM 97 6789***********************************************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGLSTKLVSI DDDGLDDWTC SSQNSLPEPP LIRRQPPSKP EPLKCPRCDS INTKFCYYNN 60 YNKSQPRHYC KGCKRHWTEG GTLRNVPVGG GRKNKRMRMT TDLVDHITGR KRVTLEEVND 120 QRYPLITSTT TSSMPSTNIS TMDEDIKNIP SLASSSLPYD IFSSLKLSSI PQDGNTHLSL 180 IPNSSTTQLS SNVYCNYDYM GKFDSTMEES TITTVMPITS SSDLFSQPWK VPETSNDFII 240 ENMSSNYWNW NEFDTLSTAA DLNIQWDDLE IKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-29	Dof family protein