PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55984.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 136aa MW: 15743.4 Da PI: 8.3904

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.5	8.1e-43	52	127	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqve+C+ad+++ak yhrrhkvCe+hsk++ vl+sgl+qr+CqqCsrfh l efDe+krsCrrrLa+hnerrrk + PHT55984.1 52 CQVEQCTADMANAKPYHRRHKVCEFHSKSSIVLISGLQQRYCQQCSRFHLLAEFDEAKRSCRRRLAGHNERRRKIS 127 *************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
MDTNKWEGKR TINEAEEEED EHESVEEDNK RKRVLSPSGR KLSGGGSSHP SCQVEQCTAD 60 MANAKPYHRR HKVCEFHSKS SIVLISGLQQ RYCQQCSRFH LLAEFDEAKR SCRRRLAGHN 120 ERRRKISYDS HGESLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	4e-42	SBP family protein