PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55982.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 306aa MW: 32853 Da PI: 9.9984

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.7	5.4e-38	34	90	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k++ PHT55982.1 34 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRT 90 689**************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MEQGGRSSGE SDRNQQQRRM KMPENNSSQP QPPPQKCPRC DSNNTKFCYY NNYSLTQPRY 60 FCKTCRRYWT QGGTLRNVPV GGGCRKGKRT MKGGSVGVSC GSSSSASESS SRSYQQQSQQ 120 IPNLSAAAAA VFFSGNNSSR SQPPTLPSLS SLYTGGVGGG SGFLSSLASM QSMTQLSQGV 180 NNDHSQLGVI SASNSSQFGN FNIPSSIPPK VQINQQMESG IYQMVNREKP MESSFYPSDQ 240 ISQFQPTRPL GSWTQRFINN NNNNNIWPNA SASSSSSGGA NSSTTAAGAS LNPNQWPDLP 300 GFGPSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-33	Dof family protein