PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55923.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 290aa    MW: 33039.6 Da    PI: 8.4614
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.91.2e-33581981128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWka 85 
                 lp+G++F+P+d e++ e+L++k+ +++++++        +i+   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W++
  PHT55923.1  58 LPAGVKFDPSDGEIL-EHLEAKILSDTHKIHPliddfilTIDGQnGICYTHPQKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVDteidggETRWHK 154
                 799***********9.99*****99995553344444433665546**********.566677888******************743346555778*** PP

         NAM  86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 tgk+++v+  +g ++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PHT55923.1 155 TGKTRPVYM-GGVVKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 198
                 *********.**************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MTWCNQSKGE IALPVISSLE ENNVMMINSR TRLITCPSCG HTIQLQHQRD ILHDLPGLPA  60
GVKFDPSDGE ILEHLEAKIL SDTHKIHPLI DDFILTIDGQ NGICYTHPQK LPGVSKDGQV  120
RHFFHRPSKA YTTGTRKRRK VDTEIDGGET RWHKTGKTRP VYMGGVVKGY KKILVLYTNY  180
GRQRKPEKTN WVMHQYHLGE DEEEKDGELV VSKVFYQTQP RQCGSLNIKK PLVDHHNPIM  240
KTTNFVDYYN PNPFISYNVE SQSSPQIIQN LVVHGDSSPF VIPSEASKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-104NAC family protein