PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55871.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 316aa MW: 35161.1 Da PI: 8.4977

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.8	3.4e-17	49	109	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PHT55871.1 49 KPRWNPRPEQIRILETIFNSgMVNPPRDEIRKIRARLqeygQVGDANVFYWFQNRKSRSKH 109 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.5	4.5e-36	48	111	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq PHT55871.1 48 PKPRWNPRPEQIRILETIFNSGMVNPPRDEIRKIRARLQEYGQVGDANVFYWFQNRKSRSKHKQ 111 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MASSNRHWPS MFKSKPCNSH HHQWQHDINS SLIQPRPPCN PEERSPEPKP RWNPRPEQIR 60 ILETIFNSGM VNPPRDEIRK IRARLQEYGQ VGDANVFYWF QNRKSRSKHK QRHLQAKAQQ 120 QNNSQAAPSN SSSSSSDKSS PNSLTFSIVQ QPVQTHDNSA MTQGFCFPDS TSSSPGLALS 180 ELMGVSQTPS SSKKAENEKM NLQSQLMSYT VTSTPTTVSP LISTTTIPTI SHIQGASLDP 240 NEAVGPTRST VFINDVAFEV GLGPLNVREV FGEDAVLFHS SGEPLITNEW GLTLQPLQHG 300 AFYYLVRTST PSTHDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-57	WOX family protein