PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54953.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 728aa MW: 80687.3 Da PI: 8.9536

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	54.5	3.3e-17	303	391	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + ws+eDei++L+Gl+ k++++ ++++ d a+ye +k+ ++ + ++l +K++ L++K+kk+ kk ++ s +h+++ f ls k+Wg PHT54953.1 303 SSWSKEDEITILKGLVRLKTENEIKSKKiDYIALYESIKQFLHRESDIEDLKKKVKCLREKYKKNLKK-----AKTPSVPHEEELFYLSDKFWG 391 57*******************987777***********************************.....3445668999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MKVISGTEAI VKASLPDTNP IAEVGETRLF RPDLVHRLME KVKVIKERFK IAQSCQKSYT 60 AVRQRELEFE IGVRYDVLGM VLNEKIDLVP QEGGAFWPHI ARNSERLMPH PWVGHALKGD 120 APRLGPATRD PSCGWLVSSS TGAVTVNGGR WSVDGGYGVR WLSGCLDGVR LHQQWCFAGK 180 MRRRGGGVGC FISHSVGDSD TPCLVQSEDQ MLRRAKQPPN KKKKKRCRGN DYDDVIKEER 240 KGKHVHLMPS LDDNYGDSKE PEKKSTYANT SMPDTDCGLG LCDQSGVLPE GLIKEKTGSS 300 LSSSWSKEDE ITILKGLVRL KTENEIKSKK IDYIALYESI KQFLHRESDI EDLKKKVKCL 360 REKYKKNLKK AKTPSVPHEE ELFYLSDKFW GDGDKDHEIN QQITCHSSAP SCSSIRPYKS 420 LDLEASDKIF VGDLGLALVT INRNQSNPVH AALEQYKLVS QSLRIRKCYG NQILEARITP 480 KMEELSELEE QKIARSYFDT KIQHALLVLD AYKASNGFAT DCGLKKDTPK VMNEGNSPPA 540 TIGGHTPITG KPSNTSSKSV SQMCQSQERE KNKEMNIKNR ENQCDSSIPS HTVASSKEIK 600 ESATPLPDGM TVEVLVKGKP DGKVASTGKQ VEIYFDAKLR DTGCFIGSNI AAGTPHKFCL 660 GHKKMLKGLN IGIEGMQVGE KRRLIIPPSL GPGSNAKPPI LPDSWLQYDV ELADVYCAGY 720 GKGLGSVK

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MKVISGTEAI VKASLPDTNP IAEVGETRLF RPDLVHRLME KVKVIKERFK IAQSCQKSYT  60
AVRQRELEFE IGVRYDVLGM VLNEKIDLVP QEGGAFWPHI ARNSERLMPH PWVGHALKGD  120
APRLGPATRD PSCGWLVSSS TGAVTVNGGR WSVDGGYGVR WLSGCLDGVR LHQQWCFAGK  180
MRRRGGGVGC FISHSVGDSD TPCLVQSEDQ MLRRAKQPPN KKKKKRCRGN DYDDVIKEER  240
KGKHVHLMPS LDDNYGDSKE PEKKSTYANT SMPDTDCGLG LCDQSGVLPE GLIKEKTGSS  300
LSSSWSKEDE ITILKGLVRL KTENEIKSKK IDYIALYESI KQFLHRESDI EDLKKKVKCL  360
REKYKKNLKK AKTPSVPHEE ELFYLSDKFW GDGDKDHEIN QQITCHSSAP SCSSIRPYKS  420
LDLEASDKIF VGDLGLALVT INRNQSNPVH AALEQYKLVS QSLRIRKCYG NQILEARITP  480
KMEELSELEE QKIARSYFDT KIQHALLVLD AYKASNGFAT DCGLKKDTPK VMNEGNSPPA  540
TIGGHTPITG KPSNTSSKSV SQMCQSQERE KNKEMNIKNR ENQCDSSIPS HTVASSKEIK  600
ESATPLPDGM TVEVLVKGKP DGKVASTGKQ VEIYFDAKLR DTGCFIGSNI AAGTPHKFCL  660
GHKKMLKGLN IGIEGMQVGE KRRLIIPPSL GPGSNAKPPI LPDSWLQYDV ELADVYCAGY  720
GKGLGSVK