PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54943.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 335aa    MW: 37680.2 Da    PI: 5.3998
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57342.41.9e-13145212271
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71 
                  fqr+w+++De +lL ++ +++a +gk+p++  +++++++k++isf+ +  q+++Kir+LK+  +k +++
  PHT54943.1 145 PFQRVWTDKDEKILLEAIGSYRAIHGKEPTS--NNLFSIIKGKISFEPTLVQVCNKIRSLKRIKRKPRQR 212
                 69************************98765..89**************************966665555 PP

Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSLANSQTNS SEKLIMKSSN VKMSGFQRDM KKNLQTNQQQ PVKNSKDMPT INWACLYNGT  60
PDGLKEGFGD DVNDDEEVRP RDDVNVNDDD EGKKDNDEES KGGTTKSKDE QDNDIGSSDE  120
VQESTSKAIT HVKDDDALVK TQSKPFQRVW TDKDEKILLE AIGSYRAIHG KEPTSNNLFS  180
IIKGKISFEP TLVQVCNKIR SLKRIKRKPR QRIVEDTPAE KSLFCSSEKV LGVNKMCSTT  240
AQSSKGKKVL NDAEVARIVM TLFQGYEGDE VMQIETSTRK VSQLIASGLS TKWKDLIKAQ  300
ANQYLIGLNN RKSKVELFLE MMEVEAREHD DNDTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202209LKRIKRKP
2204210RIKRKPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-09GeBP family protein