PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT54943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 335aa MW: 37680.2 Da PI: 5.3998 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 42.4 | 1.9e-13 | 145 | 212 | 2 | 71 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71 fqr+w+++De +lL ++ +++a +gk+p++ +++++++k++isf+ + q+++Kir+LK+ +k +++ PHT54943.1 145 PFQRVWTDKDEKILLEAIGSYRAIHGKEPTS--NNLFSIIKGKISFEPTLVQVCNKIRSLKRIKRKPRQR 212 69************************98765..89**************************966665555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MSLANSQTNS SEKLIMKSSN VKMSGFQRDM KKNLQTNQQQ PVKNSKDMPT INWACLYNGT 60 PDGLKEGFGD DVNDDEEVRP RDDVNVNDDD EGKKDNDEES KGGTTKSKDE QDNDIGSSDE 120 VQESTSKAIT HVKDDDALVK TQSKPFQRVW TDKDEKILLE AIGSYRAIHG KEPTSNNLFS 180 IIKGKISFEP TLVQVCNKIR SLKRIKRKPR QRIVEDTPAE KSLFCSSEKV LGVNKMCSTT 240 AQSSKGKKVL NDAEVARIVM TLFQGYEGDE VMQIETSTRK VSQLIASGLS TKWKDLIKAQ 300 ANQYLIGLNN RKSKVELFLE MMEVEAREHD DNDTE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 202 | 209 | LKRIKRKP |
2 | 204 | 210 | RIKRKPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 2e-09 | GeBP family protein |