PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54752.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 577aa MW: 65953.2 Da PI: 4.911

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.7	7.7e-56	6	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewy+Fs+rd+ky++g+r+nratk+gyWkatgkd++v s + PHT54752.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPdKsLLPSKDMEWYYFSPRDRKYPNGTRTNRATKAGYWKATGKDRKVNS-QM 102 79**************************.99**********96435566888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 + +g+kktLv+y+grap+g++t Wvmheyrle PHT54752.1 103 RPIGMKKTLVYYRGRAPHGTRTGWVMHEYRLE 134 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK 60 DMEWYYFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH 120 GTRTGWVMHE YRLEERECEV ANGLQDAYAL CRVFKKSLNA PKSGDHYASD RSSSINDQLY 180 TEGRGDDYES PDYGMPPSAT TSSSMLLHGS PLMHVAGPST DDKWMQYLSD EAFTFNNPSF 240 PSTNEAFPYH PSKVDIALEC ARLQHRFALP PLEVQDFPQV GYMMSQSNDV MYHQGTTHQT 300 DIVQEILSVD QASHDLTNQD SWAGNYNINY EDPSDDFSFL PHSNNQIHHD LDNSFNFMEQ 360 LKAEDDQDNA RSIAIGDFDE DFKSESMVER LRWVGMPEND DKTFHEDYKA VPIENILGPH 420 KEEQDQLQGE SSGQHNNFNE TEANNFSLGF SNDDNLLDDE DTDGFSSSPS FEVYEKIELS 480 QGMFIATRQA ANTFYHQVAP SKTVAIHRDL VTTVHDLPIR KMTKSATFLD TFMEFSRKTL 540 SGVVMKVTRS NWRGTVLSTL VELIALLHTF WSMLGNA

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK  60
DMEWYYFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH  120
GTRTGWVMHE YRLEERECEV ANGLQDAYAL CRVFKKSLNA PKSGDHYASD RSSSINDQLY  180
TEGRGDDYES PDYGMPPSAT TSSSMLLHGS PLMHVAGPST DDKWMQYLSD EAFTFNNPSF  240
PSTNEAFPYH PSKVDIALEC ARLQHRFALP PLEVQDFPQV GYMMSQSNDV MYHQGTTHQT  300
DIVQEILSVD QASHDLTNQD SWAGNYNINY EDPSDDFSFL PHSNNQIHHD LDNSFNFMEQ  360
LKAEDDQDNA RSIAIGDFDE DFKSESMVER LRWVGMPEND DKTFHEDYKA VPIENILGPH  420
KEEQDQLQGE SSGQHNNFNE TEANNFSLGF SNDDNLLDDE DTDGFSSSPS FEVYEKIELS  480
QGMFIATRQA ANTFYHQVAP SKTVAIHRDL VTTVHDLPIR KMTKSATFLD TFMEFSRKTL  540
SGVVMKVTRS NWRGTVLSTL VELIALLHTF WSMLGNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-143	NAC family protein