PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54455.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 323aa MW: 35340.6 Da PI: 6.4477

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.5	6.2e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl PHT54455.1 46 KPRLRWTADLHERFVDAVTQLGGPSKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	70.3	3.1e-22	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+k+I+rtmg kg+tl ++ks++qky+ PHT54455.1 48 RLRWTADLHERFVDAVTQLGGPskaTPKAIMRTMGvKGLTLFHLKSHLQKYR 99 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MYPRLIQSGQ EDEYIQHHGC DVNVVGIHHQ RVNAGDPCLV LTSDPKPRLR WTADLHERFV 60 DAVTQLGGPS KATPKAIMRT MGVKGLTLFH LKSHLQKYRL GKQSQKDLDE ASKDGLTATY 120 SLESPCSGGT TQQLPASDLN EGFEVKEALR AQMEVQSKLH LQVEAEKHLQ IRQDAEQRYI 180 TMLEKACKML ADQFIGDVVT ENHQETYQGL GTKTQLSPLC NPNGLCPSDS ADLIGVHCPE 240 EVSPRIHPQR TDCSTESCLT SHESPAGLPL EGSSPGGKKR GLSGDSTHAS YVWGEADMRS 300 SGVHAIQVNC FGFTGSNVQN VSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-69	G2-like family protein