PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54038.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 309aa    MW: 34517.3 Da    PI: 4.9746
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-184290355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++ 
  PHT54038.1 42 YLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARAMRS 90
                88******.**********965...5************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDFIKSSTSS STNKSTKPRK NNGASTQSVK QKAEEQQSNI RYLGVRRRPW GRYAAEIRDP  60
TTKERHWLGT FDTAEEAALA YDRAARAMRS NNKSNKPTRT NFVYSDMPHG YSVTCIVSPD  120
EVYQHHQQQI LVFGQAENAP APTVDCGARF NHFSVSNMNN VGGDSGSGGA DFALQQYYSN  180
HNYDMHMEDS YRYDSNNTTS IELPPLPDDI TSSGNNCYYF NEQSTQFPIT TISEMGYNNS  240
NNNDSLNEMI IGTNNEYQYG GSTITTTSGT TATAGSFSYF GFDDCLQPLQ CSSNMQDESN  300
NNSLGYWFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.18e-30ERF family protein