PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 129aa MW: 14649.9 Da PI: 4.6457 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 91.4 | 8.2e-29 | 1 | 72 | 30 | 101 |
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +k +edv ++s eaP+l++kace+fi eltlrsw ++eenkr ++k d+a++++rt+ dflvdiv +de+ PHT53920.1 1 MKDNEDVCKVSGEAPMLMAKACEMFIQELTLRSWFNTEENKRWMVQKKDVAKVIERTELIDFLVDIVHKDEI 72 89*******************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MKDNEDVCKV SGEAPMLMAK ACEMFIQELT LRSWFNTEEN KRWMVQKKDV AKVIERTELI 60 DFLVDIVHKD EIREEGTGFG PSMLGSTSSD VQNAHPPMGS EVMIRGTASS GKFELFWMLW 120 VNLTSTLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 2e-33 | NF-YC family protein |